| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0936 |
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| Symbol | |
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| ID | 4603188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1129602 |
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| End bp | 1130891 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780271 |
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| Product | NADH dehydrogenase |
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| Protein accession | YP_926813 |
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| Protein GI | 119774073 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.151731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCACAA AGCGAATAGT CATAGTTGGC GGTGGTGCGG GTGGGCTTGC GTTGGCCTCA
AAATTGGGGC GAAAGCTGGG CCTGAAAAGC AAAGCCGACA TTTTGCTCAT AGATAGAAGC
CCAATTCATA TCTGGAAACC TAAGCTGCAC GAAGTAGCAG TCGGGGCCAT AGACCAATCG
ATTGAAGGGT TGCTTTATCG CGATCATGGT TTAAAAAACG GCTACCGCTA TCAGCGCGGC
TCGTTGGAAG CGCTGGACCC GGATGCAAAA ACCATCCAAC TGTCAGCGCT TTACAATGAG
CGGCAAGAAC TGCTGATGGG GCCCCGTACC ATAGAGTATG ACTATCTGGT GCTCGCGCTT
GGCGGTGTGT CCAACAGTTT CAATACCCCT GGCGCCGAAT CTCACTGTAT TTTTCTCGAT
AACCTGCAGA ATGCTGAGCA ATTTCACCGG CAATTGCTTG ATGGACTGAT GCTGCTGGAT
GAAACCCAAT CACGTTTGAG CATTGGTATC GTTGGGGCTG GAGCGACGGG AGTTGAGCTT
GCTGCTGAAC TCCATCACGT TGTTGAATCG GTCAGAGAAT TTGGCTATCA GAATATTTCC
AAGCAGCACC TGGATATACA TCTTATCGAA GCCGCACCTA AAATTTTGCC ACAGCTACCC
GATAGGGTCA GTGGCCGCGC GCAGGCAGTC CTCGATAAAA TAGGCATTCA CCTACATCTT
GGCGTGCAGG TTAAGGAAGT GACGAAAGAA GGTTTTACCA CCCAGGATGG TAACCTTATC
AGGGCGGATA TCAGGGTTTG GGCCGCAGGC GTTAAAGGCC CGAATGTGTT TTCAGACCTC
AGCAAGTTAC CCATCACCCC CAGAAATCAA GTGGAGGTGG ATGCCTGTAT GCGGGTCAAA
GGGCACACAG ATATTTATGC TTTGGGTGAC TGCGCCCAGC TGATACTGGC TGATGGGAAG
CCCGTGCCTC CCAGAGCACA GGCGGCGTCG CAAATGGCTG AAACTTTATA TCACAACATC
CTAAACCGCC TGGCAGGGCA GGCTGAAGCG CCATTCGAAT ATCGCGATTA CGGTTCTCTG
GTATCACTCA GTCGCTTCTC TGCTGTAGGC AATTTGATGG GGAATTTAAG ACGAGGTGAT
TTTTTTATTG AGGGGCACGT GGCTCGCTTT ATGTACCTAT CCCTCTATCA TCGACATCTT
TCCAGTCTAT TTGGCTGGTT TTCGGCGCTG GTGTATCGCT TGGCGCAAAA GCTGCTGCGA
TGGCAGCGCC CCAAGCTTAA GTTGCATTGA
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| Protein sequence | MGTKRIVIVG GGAGGLALAS KLGRKLGLKS KADILLIDRS PIHIWKPKLH EVAVGAIDQS
IEGLLYRDHG LKNGYRYQRG SLEALDPDAK TIQLSALYNE RQELLMGPRT IEYDYLVLAL
GGVSNSFNTP GAESHCIFLD NLQNAEQFHR QLLDGLMLLD ETQSRLSIGI VGAGATGVEL
AAELHHVVES VREFGYQNIS KQHLDIHLIE AAPKILPQLP DRVSGRAQAV LDKIGIHLHL
GVQVKEVTKE GFTTQDGNLI RADIRVWAAG VKGPNVFSDL SKLPITPRNQ VEVDACMRVK
GHTDIYALGD CAQLILADGK PVPPRAQAAS QMAETLYHNI LNRLAGQAEA PFEYRDYGSL
VSLSRFSAVG NLMGNLRRGD FFIEGHVARF MYLSLYHRHL SSLFGWFSAL VYRLAQKLLR
WQRPKLKLH
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