| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0908 |
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| Symbol | |
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| ID | 4603160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1097208 |
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| End bp | 1099250 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780243 |
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| Product | signal transduction histidine kinase-like protein |
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| Protein accession | YP_926785 |
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| Protein GI | 119774045 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCTG GTTCTGCAAA CATGCTTTTT GATACCCGCC ACGCATTACT TGATCCACTT
TTTCTTGCCG AGCTGGGTAA GATCCAGGCT CGCTTTATTC GCGGGGAGGA TGTCATATTG
CCTCTGTGCC GCATATTGGC CGAACAGAGT GGTGCACAGG CCGTATTGGT GATAGATGCC
TCCTCGAGCA ATGCGCAAGA TATGCCAGAG TCCGCAGCAT GCTGGTGCCG CGACCCAGTG
CGTTACCTCA CCCTCTGGAA AGATGTTCGT GACTGGCCCT TCTCACATCA GGAACCCTTG
GTGCATTGCT GGCATAAGTT TGTGGTGTGG CCGGTAAAAC ACACGGACTT GTTGATATTT
TTCCATACAC CTAAAGATGC CTGGTTTGGC TTTTTACTGA GTTTCAGTGA TCTGCTTGCC
GATATTTTGA TGGGAATACT GACTCTGCAT GTTGAGCATT GGCGTGAGGG TGGGGACAGG
GAGACCAGAG GGGATATAGA CAACATCATG TTCCGCTCCA TTGTCAGAAA CAGCGATGAT
TTCATTATGG TGGTTAAGCA GTTTCACGAT GGCAACAGTG AGATTGTCTA TGTCAATGCC
GCAGTGACCT GCATCAGTCT CTACCCACGC AGCGAACTCA AAGGCATATC GCTGGGTAAA
CTGTTTCCTA AAGGTGTTCA GGCGTCCGGT AACGAGGTCG ACCTTTACGA CATCCTCTGC
TCCGGAAAGG ACTTCAATGG CGAGGTTTAC TGTACCAAGG CCAATGGGGA ATTGGCGATT
TTACACTTAC ATGTCATTGC ACTGGAGCAG GATAGTAAAG GCGGGCTCTA TGCACTTATT
GGCCGTGATT ATACCGACTT CAAGGCGATG GAAAAAACCG TCAGCCGGGC GCAGAAGATG
CAGGCTATTG GCCAGCTGGT TGGCGGAATT GCCCATGACT TCAATAATAT TCTTGGGGTT
CTTAAGGGGA ATCTCGAGCT GATACAGCTA AAAAACAAAG ACGAACGGTT GGAAAACTAC
CTGACCACAG CGCTTAAATC CTGTCAAAGG GGCACAGAAC TCACCCGGCG GTTATTACAG
TTTTCCCGGC AAGAACAGTT TAACGCTCAG CATTGTCAGG TGAATGAGGT GATAGAGGGC
TTAAGAGATC TCTTTGCCAA ATCCCTGACC AGCCAGGTGG CCTTGAATGT GCAGCTGGCC
CCCTTTACCC GGGATGTGAT GGTCGATAAG GGCGATTTGG AAGATGCACT GCTGAATCTG
GTGATCAATG CCAAGGATGC CATGAATGGA GAGGGAGCCT TAACCATAGC CACCGGGGAA
TCTGAGCTTG CTGGCTTTCT GCCGGGGATT GGTGAGCGGG TATTGGTTGA GCCTAGCTGC
TATGTGTGGA TTTCGGTTAC CGATGCAGGG CACGGTATCC CGATTCAGCT GCTTGATAAA
ATCTTTGAGC CTTTTTTTAC TACCAAAGAT AAGAGCAAGG GCACCGGTCT TGGACTCTCC
ATGGTCTATG GTTTTGTAAA ACGATCCCGA GGCTACATGA ATGTGCTGAA AACAGGGCCT
CAAGGTACTG AAATTCGGCT CTGGTTTCCG GCTGTAACGA TAAAACAGGC TGCCTCTGCC
AAGGCTTTGG CTGCCGAAAC GAGCATTCCG AGGGTGGATA GTCCTCTAAA AGCCCTGTTG
GTAGACGATG AACCAGAGCT GCTTCAGGTA ATGCGGGACT ATTGTGAACT CATGGGCATG
GAGGTTGAAA CCTTCAGCGA TGGCGTTACT TTTAGAAACA ACTTTCAAAG TAAGGTCCTG
GATGCCGGGC TACTCATTAC CGATGTACTG ATGCCGGGTG GCATTAATGG TTATGAATTG
GCCAGCGATG TCATAGCAAA GCATCCCATG CCGGTGCTTT TGGTGTCGGG GTTTATTGAA
GATATCGGTG TGAACCGATA TGAGGAAATG CCGTTCAAAG TGCTTCATAA GCCGTTTGAT
TTGCACGCAT TTGCCAATGC ATTGGCCGAA GTGGGTGTCC GTTTCATGGA TAGGGAGAGT
TAA
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| Protein sequence | MESGSANMLF DTRHALLDPL FLAELGKIQA RFIRGEDVIL PLCRILAEQS GAQAVLVIDA
SSSNAQDMPE SAACWCRDPV RYLTLWKDVR DWPFSHQEPL VHCWHKFVVW PVKHTDLLIF
FHTPKDAWFG FLLSFSDLLA DILMGILTLH VEHWREGGDR ETRGDIDNIM FRSIVRNSDD
FIMVVKQFHD GNSEIVYVNA AVTCISLYPR SELKGISLGK LFPKGVQASG NEVDLYDILC
SGKDFNGEVY CTKANGELAI LHLHVIALEQ DSKGGLYALI GRDYTDFKAM EKTVSRAQKM
QAIGQLVGGI AHDFNNILGV LKGNLELIQL KNKDERLENY LTTALKSCQR GTELTRRLLQ
FSRQEQFNAQ HCQVNEVIEG LRDLFAKSLT SQVALNVQLA PFTRDVMVDK GDLEDALLNL
VINAKDAMNG EGALTIATGE SELAGFLPGI GERVLVEPSC YVWISVTDAG HGIPIQLLDK
IFEPFFTTKD KSKGTGLGLS MVYGFVKRSR GYMNVLKTGP QGTEIRLWFP AVTIKQAASA
KALAAETSIP RVDSPLKALL VDDEPELLQV MRDYCELMGM EVETFSDGVT FRNNFQSKVL
DAGLLITDVL MPGGINGYEL ASDVIAKHPM PVLLVSGFIE DIGVNRYEEM PFKVLHKPFD
LHAFANALAE VGVRFMDRES
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