| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0854 |
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| Symbol | |
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| ID | 4603106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1040123 |
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| End bp | 1041112 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780189 |
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| Product | CobD-related protein |
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| Protein accession | YP_926731 |
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| Protein GI | 119773991 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.411862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA GCCAGTTTGT CAGCCAGCTG ATTGCCCTGG ATGGAGCCCT GTTTGAAGGC
TTCCTTATCA TCCTGTGCGC GCTGCCACTG GCACGACTGG CTCCTTTGCC GAGGGAAATG
CAGCCACTGG TGTGGTTTGG CGTGCTGGCA AGAGAGCTTG CCCGCAAAGT GAATCACCCA
TCGCGGGGAC CGCGCCAACA GCTTATTGCC GGTATTATGG CGACAATACT GCTGGTACTG
CCCTTTTGGC TTATCATCGC CTTTTTGCTG GACTTGGCAG CCTTTCCCTG GTTTTTCGAG
TTTTTAATTC TCTACCTCTG CCTGTCGGAT GCCAGTTTTG CCCAGGTCGC CGAAGAGGTG
CAGCGGGCAC TGGGCCATGG CGATAAAGAC AGGGCCAGAA AGCTGCTGAG ACAGTACCTG
TCACGGGATA CCGCTGAGCT ATCCGAGGCA GGGCTTGCCA AGGCCACCAT CGAAAAGCTG
GTCACGGCCC CCATCTACGG CACAGCAGGG GTGGTGTTTT TCTATGCCCT GGCCGGTGCG
CCCATGGTGC TGCTGGTGCG AATGCTCAAA CAGCTGGAGT TGGTGTGGCC CCCCATGTCA
CCGGATTTCC GTGCCTTTGT CGCGCCGGTT AATCTACTGG TCTCGGCACT GCTTTACATT
CCTGCCTGGC TATGGAGCCT GACACTGGCC ATTGTTGGCG GCCCCAGCGG TTTTAAGGCC
CTGCTAACCC CCAGACGCTG GCAGCCCCTG TCCAATCCCA TGCGGGCGGC ATATGTTGCC
GCGACAGTGC TGAACACAGA GCTTGGCGGA CCACACAAAT ACCGAGGCAA CCGGGTTGCC
GTAGATAAGG TCGGCAAAGG CCCCTTGCCC GATACCGCCA AAATCGGTGA AGCCATAAAA
TTGTCCAACC GTGCCTGTTT CAGCTGGTTG GCCTTTCTGC TGTTTTTACC CCTTGCATGG
ACCCTGCTCA GATACAGCCA GACGCTGTAA
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| Protein sequence | MTESQFVSQL IALDGALFEG FLIILCALPL ARLAPLPREM QPLVWFGVLA RELARKVNHP
SRGPRQQLIA GIMATILLVL PFWLIIAFLL DLAAFPWFFE FLILYLCLSD ASFAQVAEEV
QRALGHGDKD RARKLLRQYL SRDTAELSEA GLAKATIEKL VTAPIYGTAG VVFFYALAGA
PMVLLVRMLK QLELVWPPMS PDFRAFVAPV NLLVSALLYI PAWLWSLTLA IVGGPSGFKA
LLTPRRWQPL SNPMRAAYVA ATVLNTELGG PHKYRGNRVA VDKVGKGPLP DTAKIGEAIK
LSNRACFSWL AFLLFLPLAW TLLRYSQTL
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