Gene Sama_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0842 
Symbol 
ID4603094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1027560 
End bp1028363 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID639780177 
Producthypothetical protein 
Protein accessionYP_926719 
Protein GI119773979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.635003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATT ATCAACGTTG GCTCGATAGG CTGCAAGTGA TGGAGCGCAA ATTCCGCCCT 
TCGAGCTGGT ATTTGTTTTT GTTGATGCTG GTCGCGTTTT TACTGGGTGC CCTTAGCTAC
CATTTGACCC TGTCCATGGA GCAACCCGTG TTGAATCTTG GTGGCGGCAG GGCCAAGCAA
CTGGCCGAGG AGCTGAAAAC CCAGAATCAA CTGCTGGCGA GTCGCAATCT GGAGCTGGCC
GTGGAGAAGG AAGCCAATGT CCAGATGCAG GCCATGTTCA CCGAACAGGC CGCCAAACAG
CGTGAGCTTG AGCGGGAGCT GGCGTTTTAC CGCGCTGTGA TGGCGCCCAA TGAAAATGCC
GAAGGTGTTA CCATCCACGG AATGGAGCTC ACGGCGTCCC CGGTTGAGGG GCAACAAAGG
CTCAAGGTGG TGTTAACCCA ACTGCAAAAG CGGCGGCAAA ACATCAAGGG AAGCCTGGAG
TTAACCCTGG TGGGGTTGGT GGACAACAAG CTGACCAGCC TGCAGCTGAA AGACGTGGGA
GCCAAGCTTG ATAATTTCGA CTTCCGTTAC TTCCAGGTGC TTGAAACTCC TGTGACATTC
CCGGCAGAGT TTCAACTGAC GACCATCAAG GCCAAGATAC GTGTCTCCAA GGGGCGTTAT
AATCAGGCCG CGCTGGCAGA GCAGGAATTC AGCCTGCCGA TGCTGACGGG AGAGACAAAA
GAGCCCGGTA TAATACTTGA ACAAAATAGT CAGGTAACGG ATAATTCCGG GCAGCAATCT
GAAGTTCGAG GTAGTAATGA CTGA
 
Protein sequence
MANYQRWLDR LQVMERKFRP SSWYLFLLML VAFLLGALSY HLTLSMEQPV LNLGGGRAKQ 
LAEELKTQNQ LLASRNLELA VEKEANVQMQ AMFTEQAAKQ RELERELAFY RAVMAPNENA
EGVTIHGMEL TASPVEGQQR LKVVLTQLQK RRQNIKGSLE LTLVGLVDNK LTSLQLKDVG
AKLDNFDFRY FQVLETPVTF PAEFQLTTIK AKIRVSKGRY NQAALAEQEF SLPMLTGETK
EPGIILEQNS QVTDNSGQQS EVRGSND