Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0842 |
Symbol | |
ID | 4603094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1027560 |
End bp | 1028363 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780177 |
Product | hypothetical protein |
Protein accession | YP_926719 |
Protein GI | 119773979 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.635003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATT ATCAACGTTG GCTCGATAGG CTGCAAGTGA TGGAGCGCAA ATTCCGCCCT TCGAGCTGGT ATTTGTTTTT GTTGATGCTG GTCGCGTTTT TACTGGGTGC CCTTAGCTAC CATTTGACCC TGTCCATGGA GCAACCCGTG TTGAATCTTG GTGGCGGCAG GGCCAAGCAA CTGGCCGAGG AGCTGAAAAC CCAGAATCAA CTGCTGGCGA GTCGCAATCT GGAGCTGGCC GTGGAGAAGG AAGCCAATGT CCAGATGCAG GCCATGTTCA CCGAACAGGC CGCCAAACAG CGTGAGCTTG AGCGGGAGCT GGCGTTTTAC CGCGCTGTGA TGGCGCCCAA TGAAAATGCC GAAGGTGTTA CCATCCACGG AATGGAGCTC ACGGCGTCCC CGGTTGAGGG GCAACAAAGG CTCAAGGTGG TGTTAACCCA ACTGCAAAAG CGGCGGCAAA ACATCAAGGG AAGCCTGGAG TTAACCCTGG TGGGGTTGGT GGACAACAAG CTGACCAGCC TGCAGCTGAA AGACGTGGGA GCCAAGCTTG ATAATTTCGA CTTCCGTTAC TTCCAGGTGC TTGAAACTCC TGTGACATTC CCGGCAGAGT TTCAACTGAC GACCATCAAG GCCAAGATAC GTGTCTCCAA GGGGCGTTAT AATCAGGCCG CGCTGGCAGA GCAGGAATTC AGCCTGCCGA TGCTGACGGG AGAGACAAAA GAGCCCGGTA TAATACTTGA ACAAAATAGT CAGGTAACGG ATAATTCCGG GCAGCAATCT GAAGTTCGAG GTAGTAATGA CTGA
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Protein sequence | MANYQRWLDR LQVMERKFRP SSWYLFLLML VAFLLGALSY HLTLSMEQPV LNLGGGRAKQ LAEELKTQNQ LLASRNLELA VEKEANVQMQ AMFTEQAAKQ RELERELAFY RAVMAPNENA EGVTIHGMEL TASPVEGQQR LKVVLTQLQK RRQNIKGSLE LTLVGLVDNK LTSLQLKDVG AKLDNFDFRY FQVLETPVTF PAEFQLTTIK AKIRVSKGRY NQAALAEQEF SLPMLTGETK EPGIILEQNS QVTDNSGQQS EVRGSND
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