| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0781 |
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| Symbol | |
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| ID | 4603033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 963235 |
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| End bp | 963948 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780115 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_926658 |
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| Protein GI | 119773918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0503514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATACC CAGCCCCCCT GTCCAGCGCT GTGCTCATTA CCCGCTATAA ACGATTTTTA
GCCGATGTCA CCCTGGAGGA CGGCAGTCAG ACAACCCTGC ACTGCCCCAA TACCGGCTCG
ATGAAAAACT GCCTGTATCC CGGTAAACGG GTGTGGTTTT CGACCTCGGA CAACCCCAAG
CGCAAGTACG CCCACACCTG GGAGCTGGCC GAGGATGACC GGGGCAACCT GATTGGCATT
AACACGGCGC GGGCCAATCA ACTTGCCGAA GAAGCCATTG GGCTGGGGCA GATATCCGAG
CTTCAGGGCT ACAACCAAAT CCGCCGCGAA GTGAAGTATG GCAATGAGAA CAGCCGCATC
GATTTACTGC TGAGTGAGGG GCAAGCCCCA GACTGCTATA TAGAAGTCAA AAGTTGCACT
CTGTTGGACC ATGACTGGGG ACTGTTTCCC GACGCAGTAT CCACCCGTGG ACAAAAGCAC
CTGCGGGAGC TGATGGAGAT GAAACGCCAG GGCTACCGGG CGGTGCTGCT GTTTGTGGTG
CAACATCAGG GGATCCACAG AGTAGCGCCT GCCGAGGCTA TAGATCCCAA ATATGCGGCG
CTGCTGAGGG AGGCCATTGC GGCCGGTGTT GAAGTGCTGG CCTATGGATG TATGATGAAT
AACAAAGGCT TGCAGTTAAA CATCCCGATA CCTTTCCACC CTGATGCGGG GTAA
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| Protein sequence | MEYPAPLSSA VLITRYKRFL ADVTLEDGSQ TTLHCPNTGS MKNCLYPGKR VWFSTSDNPK
RKYAHTWELA EDDRGNLIGI NTARANQLAE EAIGLGQISE LQGYNQIRRE VKYGNENSRI
DLLLSEGQAP DCYIEVKSCT LLDHDWGLFP DAVSTRGQKH LRELMEMKRQ GYRAVLLFVV
QHQGIHRVAP AEAIDPKYAA LLREAIAAGV EVLAYGCMMN NKGLQLNIPI PFHPDAG
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