| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0769 |
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| Symbol | |
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| ID | 4603021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 952789 |
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| End bp | 954165 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780103 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_926646 |
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| Protein GI | 119773906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTAC ACATTCTCGG GATTTGCGGC ACCTTTATGG GTGGTCTGGC GCTGCTGGCG
CGGGCCATGG GACACAAGGT CACAGGATCG GATGCCAACG TGTATCCGCC CATGAGCACT
CAGCTCGAAG AGCAGGGTAT TGAACTCATT CAGGGTTTTG ACCCTGTGCA GCTTGAAAGC
GAACCGGATT TGGTGGTGAT TGGCAATGCC ATGAGCCGGG GCAATCCCTG CGTGGAAGCC
GTGCTCAACA AGGGCATGGC CTACACCTCC GGGCCACAAT TTCTGCGCGA TCACATACTG
CCCGGTCGCT GGGTGCTGGC GGTGGCCGGT ACCCACGGTA AAACCTCCAC CTCCAGCATG
TTGGCGTGGG TATTGGAGCA CTGCGGCTAT GAGCCGGGGT TCCTGATTGG TGGCGTACCA
CAAAACTTCG GCGTATCAGC CCGTTTGGGG AATTCCCCCT TCTTTGTGGT TGAGGCCGAC
GAGTACGATA GCGCCTTTTT CGATAAGCGT TCCAAGTTTG TTCACTATCA ACCAAAAACC
CTGGTTATCA ATAACCTCGA GTTTGACCAC GCCGATATTT TCGACTCGCT TGCCGACATT
CAACGCCAGT TTAGCCATGT CATCCGCACC GTGCCCGGCT GTGGCAAGGT GATTTGGCCC
AAAGGCAGCA AAGCGGTGGC CGAGGTTATC GAAAAGGGGC TGTGGAGCGA GCAGGAAACC
TTTAGCCATC AGGCGGACGC CGATTGGTCG GTGCGGCCGC TGGCAGCCGA TGGCCATAAA
TTTGAAGTGT TGTTTGGCGG CGAAGTTCAG GGCGTGCTCG ACTGGCAGCT TATCGGCAAC
CACAACATGG AAAACGCGGT CATGGCCATT GCTGCGGCGC GCCACGTGGG GGTCGCCCCT
GCGGCGGCTA TTGAGGCCCT CAGCGGTTTT ATGCCGCCCA AACGCAGGCT GGAGCTGATT
GGTGAGGTAG GCGGTGTCAG CCTGTACGAT GACTTTGCTC ACCATCCAAC GGCCATTGAA
ACCACTCTCA AGGGGCTCAG GGCCAAGGTG GGCAATGCCC GTATTTTTGT GGTGCTCGAG
CCCCGCTCAA ACACCATGAA ACGCGGTGTT CACAAGGACA CCCTGGCCTT GTCTATGGCG
CTGGCCGACG AGGCCTTCCT CTATCAGGCC GACAATATCG GCTGGGATAT CCGTGATGCC
ATGGCCCAGG CCCCGCTGCC GGTAGATGTG GACTATGATA TCGACAGCAT AGTCGCCAAG
GTGACCGCCA AAGTTCAGCG CGGTGACCAG CTGGTGGTGA TGAGCAACGG CGGCTTCGGG
GGGATCCATG GCAAGCTGAA GGCGGCCATT GCCGCCAGAT TTGCCGAGTC TGTCTGA
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| Protein sequence | MHVHILGICG TFMGGLALLA RAMGHKVTGS DANVYPPMST QLEEQGIELI QGFDPVQLES
EPDLVVIGNA MSRGNPCVEA VLNKGMAYTS GPQFLRDHIL PGRWVLAVAG THGKTSTSSM
LAWVLEHCGY EPGFLIGGVP QNFGVSARLG NSPFFVVEAD EYDSAFFDKR SKFVHYQPKT
LVINNLEFDH ADIFDSLADI QRQFSHVIRT VPGCGKVIWP KGSKAVAEVI EKGLWSEQET
FSHQADADWS VRPLAADGHK FEVLFGGEVQ GVLDWQLIGN HNMENAVMAI AAARHVGVAP
AAAIEALSGF MPPKRRLELI GEVGGVSLYD DFAHHPTAIE TTLKGLRAKV GNARIFVVLE
PRSNTMKRGV HKDTLALSMA LADEAFLYQA DNIGWDIRDA MAQAPLPVDV DYDIDSIVAK
VTAKVQRGDQ LVVMSNGGFG GIHGKLKAAI AARFAESV
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