Gene Sama_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0644 
Symbol 
ID4602897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp799759 
End bp800724 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID639779979 
Productmagnesium transporter, putative 
Protein accessionYP_926522 
Protein GI119773782 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0671136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGG GATTCATCTA CAGCTATTGG CTGAGCGGCG ATCGGGCCGG ACACCCCCTC 
GATGAGGACA CGCTGAGCGC CTGGAGCCCC GAACAGGGGA ATATCTGGGT CCACCTCAAT
TATCATTCCC AAGCCGCACG GGAGTGGTTG CACCGAACCG ATTTGCCCAA ACTTGAAATT
GATGCCCTCT TGTCCCGAGA TACCCGGCCA AGGGCCATAG CGGCAGACAG CGGTCTGCTG
CTGGCGCTGC GCGGAGTAAA TCTCAATCCT GACGAAGCAC CGGAAGACAT GGTGGCGCTT
AGGCTGTTTG CCGATAAGCA CAGGGTGGTG AGCACCTGTC GTCGTAGCCT GCAATCCGTC
AAAGAAATAG CCGCCCTGAT AGAAGCCCGA ACGGGCCCCG CGACACCGGC TGAGTTTATT
CTGTCCCTGT GTGACAAGTT AACCACCCGC AAAACCGATT TTATTCACGA GCTTGAAGAG
AAATTGGATC TCTTGGAAGA CCAGGTCGTC GGCAGCAAGA GCAAGGATTT GCGAAACGAC
ATTGCCGATC TCAGGCGCCA AACCGTCATG GTGCGCCGCT ATCTGGCGCC GCAGCGGGAA
GCCTTTACCA CGCTGCAAAC CGAAACCGGG CAACTGTTTA AAAAGAGTGA ACAGTTGAAA
ATGCGGGAAA TTCGCGATCG CCTCACCCGC GCCATTGAAG ACCTCGATGC CCTCAGGGAC
AGGGCCAGCG TGACCCAGGA AGAATTGATG AGCCGCCAAT CCGAAGAGCT TAACCAGCGG
CTGTATTTTC TGTCGCTGGT GACCGCAGTA TTCCTGCCGC TGGGTTTTCT GACGGGGCTG
CTTGGCGTCA ATATCGGTGG TATCCCCGGC GCCGACACAC CCTGGGCCTT TGCCCTCTTT
TGCGCCATTT TGGTGCTGTT GGTGGTATTG CAGCTTTGGC TGTTTTACCG AAAACGCTGG
CTTTAA
 
Protein sequence
MSQGFIYSYW LSGDRAGHPL DEDTLSAWSP EQGNIWVHLN YHSQAAREWL HRTDLPKLEI 
DALLSRDTRP RAIAADSGLL LALRGVNLNP DEAPEDMVAL RLFADKHRVV STCRRSLQSV
KEIAALIEAR TGPATPAEFI LSLCDKLTTR KTDFIHELEE KLDLLEDQVV GSKSKDLRND
IADLRRQTVM VRRYLAPQRE AFTTLQTETG QLFKKSEQLK MREIRDRLTR AIEDLDALRD
RASVTQEELM SRQSEELNQR LYFLSLVTAV FLPLGFLTGL LGVNIGGIPG ADTPWAFALF
CAILVLLVVL QLWLFYRKRW L