| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0612 |
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| Symbol | |
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| ID | 4602865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 765389 |
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| End bp | 766378 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779947 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_926490 |
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| Protein GI | 119773750 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.716444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG GATTCTTCAG CGCCAAACAC TACGACATGC AGCACTTTGA CCGCACCAAT
GCCAGTTTCG GTGCTCATAT TGAATATTTT GATTCCAGAC TGTGCATGCA AACCGTCAAG
CTGGCTTATG GCTTTGAAGT GATTTGCGCC TTTGTAAACG ACGAGCTGTC GGCCGAAGTC
CTGAATGAAC TCCATGGCAA CGGTACCCGC GTCATAGCCA TGCGCTGTGC CGGTTTCAAC
AATGTGGATT TGGAAGAGGC CAAACACCTT GGTATGACGG TAGTCAACGT ACCCGCTTAT
TCGCCGGAGT CAGTCGCCGA GCACACAGTG GCCCTGATGT TGACCCTGAA CCGCAAAATT
CACAAAGCTT ACCAGCGTAC CCGGGATGCC AATTTCTCTC TGGAAGGGCT GGTGGGATTT
AACATGCACG GCAAAACCGT CGGTGTCATA GGGACCGGTA AAATTGGCCT TGCGACTATT
CGTATCCTGC TGGGCTTTGG TTGCAAGGTG GTGGCTTTTG ACCCATTCCC CAGCCCTGCG
GTAGAAGCCC TTGGGGTGCC CTATCTGGAA CTGGATGAAT TGCTGAAGCT GTGTGACGTA
GTGAGCTTGC ACTGTCCGTT GACCAAGGAA AACCATCACC TGCTGCGCGC CGAGACCTTT
GCCAAAATGA AGCCCGGTGT CATGGTCATC AACACCAGCC GTGGTGGCCT GTTGAACGCC
TTTGATGCCA TGGAAGCGCT GAAGGTCGGC CAGATTGGCG CCCTCGGGCT CGACGTGTAT
GAAAACGAAA AAGAGCTGTT TTTCGAAGAC AAGTCCAACG AAGTGATTCA AGACGATGTA
TTCCGCCGTC TGTCGGCTTG CCACAACGTG GTCTTTACCG GTCATCAGGC GTTTTTGACC
GAAGAAGCGC TTGGCGCCAT TGCGACTACG ACCCTGACCA ATGTGCAAAA AGCCCTGGCC
GGTGAGCGCT GCGGTAACGA ACTTTTCTGA
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| Protein sequence | MKIGFFSAKH YDMQHFDRTN ASFGAHIEYF DSRLCMQTVK LAYGFEVICA FVNDELSAEV
LNELHGNGTR VIAMRCAGFN NVDLEEAKHL GMTVVNVPAY SPESVAEHTV ALMLTLNRKI
HKAYQRTRDA NFSLEGLVGF NMHGKTVGVI GTGKIGLATI RILLGFGCKV VAFDPFPSPA
VEALGVPYLE LDELLKLCDV VSLHCPLTKE NHHLLRAETF AKMKPGVMVI NTSRGGLLNA
FDAMEALKVG QIGALGLDVY ENEKELFFED KSNEVIQDDV FRRLSACHNV VFTGHQAFLT
EEALGAIATT TLTNVQKALA GERCGNELF
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