| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0551 |
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| Symbol | |
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| ID | 4602806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 677767 |
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| End bp | 678540 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639779887 |
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| Product | hypothetical protein |
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| Protein accession | YP_926431 |
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| Protein GI | 119773691 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.831394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00317207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATCGAA GAGCTTTATC CACATTGCAG CGCTTTATGG CGGTGCTGTG TCTCTGCGGA
GCGGCCTGCA TAGCCAAAAC AGAGGAGCTA CGTACTGTAA CCATGGCTGT GAGTGATTCT
ATTGCACCAT TTTTTATTGA TTCACAGCAT GGTCTGCAGT ACGAGCTATT GGAGGCGATA
TTGCAACATG CTCACTTTCG TCTGAATGAA GTTAAGCTGG CCCCCAATTA TCGTGCCCGA
CGTTGGCTTG AAAATGGTGA GGTAGATTGT TTGATAAATG CGCCAGAGGG TATTGAGGGC
GCGATTTACA CTGCACCTTA CAGCCAATTT CATAATGTGG TGGTTAGCTT GGAAGCATCA
CAACTGACGA TTGATAAAAT TGATGATCTC TCATCTATCA GTTTGGTGGG TTTTCAACAC
GCCAATCGCT TTTTGGGGGT TAATTTTGCG GAACTGACAA TGCGCCACTC TAGATATTTA
GAGGTTGCCA GCCAGCGCAA TCAGGTGCGG ATGCTACTTT TGGGGCGGAC GCAGGCAATT
GTAATCGATG AAAATATCCT GCATTGGCAG CTGAAAACAT TGCAGTCAGG TCTGGGTGAG
TCTAAAGCAC TACGCTTTCA TGATCTTTTT GAACCAGTCA TGTTACGAAT AGCATGCCTT
GATCCGCGGG TTGTCATTGC GCTGAATGCT GGCATTGAAC AGATAAAGCT TCAGGGACAA
CAACAACGCA TTGTCGACAG TTACCGCCTG AAATCAGGAA CCGTTAAGTA CTGA
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| Protein sequence | MNRRALSTLQ RFMAVLCLCG AACIAKTEEL RTVTMAVSDS IAPFFIDSQH GLQYELLEAI
LQHAHFRLNE VKLAPNYRAR RWLENGEVDC LINAPEGIEG AIYTAPYSQF HNVVVSLEAS
QLTIDKIDDL SSISLVGFQH ANRFLGVNFA ELTMRHSRYL EVASQRNQVR MLLLGRTQAI
VIDENILHWQ LKTLQSGLGE SKALRFHDLF EPVMLRIACL DPRVVIALNA GIEQIKLQGQ
QQRIVDSYRL KSGTVKY
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