Gene Sama_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0483 
Symbol 
ID4602738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp594438 
End bp595316 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content54% 
IMG OID639779819 
Producthypothetical protein 
Protein accessionYP_926363 
Protein GI119773623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.499418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACTGT CGATATTCTT GCTGTTGCTC TTGAGTGTGC CCGCTATTGG CTGCGAGCTG 
ACCATGGGTT ACCGCACCAA CGAACGTCTG CCCTATATTC ACGCAGAGCC CAAGGACACC
GGACTTTTTG CCACCCTCTT TGAGGAGGCA ACCAGGCGCA TCGGCTGCGA CCTGACCGTA
ATCCGTGCCC CGAAAAACCG CATTATTCGC GAATTGGAGC TGGGCCATAT CGATTTCTAC
CCCAGCTTGA GCTTTACTCC GAAGCGTGCC AAATATGCCT GGTTTTTCCC TAACGGCCTG
CCAGAGCGCT ATACAGGGAT CAGCCGGATG AATGCACCGG ATATTAAACA ACTCGAAGAG
CTGGTTCCCC ACAAGATGGT GCTTTTGATG GCACCCGGCA GTTACGACCT TGGTGGTCTG
CCCAAGGGAC TCAATCAGCG CCGCCCCCAG GACCTGGATA TCCCCAAGGC CTTTACCATG
CTCAGGGCCA ACAAGGGCGA CTTCTTTATT TATGATGAAT TTACCCTGGA GTATTACCTC
CATCAGGAAG GGGGGGATGG CCTTAAACTG CACCCTGATT GCTGTGAAAA GCCCCGTAAC
ATGTTCTTTG GTTTTTCCCG TAAAAGCCCA CATTTTCAAG GGATAGCCAA CCCTGACTTT
ATGGCCGACA TGCCGGTATC CGCAACCAAT CAGCCAGGAA TACCGGCACC CAATAGTGTT
GCCGCACAAT TGGTACAGGC GCTTACCGAG ATGATGCACG ATGGCACCAT AGCCGCGTAC
AGAAAGGCCG TGTTACATCC TGAGGGCGGG ATTTCTCCCG CCTCTGCAAA GAAAGCCACT
AAGGCAAACT CTGCCGGGGC TGAGAGTCAA CAGCCTTAA
 
Protein sequence
MRLSIFLLLL LSVPAIGCEL TMGYRTNERL PYIHAEPKDT GLFATLFEEA TRRIGCDLTV 
IRAPKNRIIR ELELGHIDFY PSLSFTPKRA KYAWFFPNGL PERYTGISRM NAPDIKQLEE
LVPHKMVLLM APGSYDLGGL PKGLNQRRPQ DLDIPKAFTM LRANKGDFFI YDEFTLEYYL
HQEGGDGLKL HPDCCEKPRN MFFGFSRKSP HFQGIANPDF MADMPVSATN QPGIPAPNSV
AAQLVQALTE MMHDGTIAAY RKAVLHPEGG ISPASAKKAT KANSAGAESQ QP