| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0455 |
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| Symbol | |
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| ID | 4602710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 561158 |
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| End bp | 562060 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779791 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_926335 |
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| Protein GI | 119773595 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATTTGC AGCACTTTGG TCTTCGGGAG ATGCCGTTTG CGCTGACACC GAATACCGGA
TTTTTTTTCG CACTGGCGCC CCATGCAGAG GCGCTGCAAG TGCTGCAAAC TGCCCTGCAA
ACCGGTGAAG GTTTTATCAA GGTCACCGGT GAGGTGGGCA CGGGTAAAAC CCTGATTTTG
AGAAAACTGC TCAACGATCT GCCCGCGCCG CTCCGCTGTG CCTATCTGCC CAATCCCTGT
TTGTCGCCCA ACGAGCTGCG CTGGGCGCTG GCATTGGAAC TTGGCCTGAA ATACTCCGCC
AATATCGATC AGCAGCAGTT AACCAGTCTT ATACAGCATC AACTGATGGC GCTGGCCGCC
CATGGGCACA GCGTTGTGCT TATTCTGGAC GAAGCCCAGG CATTGCCACA GGAGAGTTTG
GAAACCTTAA GGCTGTTTAC CAACCTGGAG ACAGAGAGCC GCAAGCTCTT GCAGGTGGTG
CTCTTTGGCC AGCCTGAATT GGATGAAAGG CTGGCAAGCC CTGAGCTTAG ACAACTGCGG
CAAAGGATCA CCTTCAGCTA TCGTTTGCGC CCCCTCAACC GGCAAGAAAT AGAGGCCTAT
GTGCAGCACA GACTAAAGGT GGCGGGGTTA AGCGATACAG GCCTTTTCGA TAGCGCCGCC
ATAGCCGCCA TCGCCAGGGC ATCGAGAGGC ATACCCAGGC TTATCAATAT TCTGGCCCAC
AAGGCGTTAA TGCTGGGGTT TGGCGAGGGG CTGCAACGCA TTGGACGCCG CCAGGCGCTG
GGTGCCATAA GGGACACAGA AGATGCATCC AAACCAATCT GGCCCAATTG GTTGCCGGTT
CTCAGTCTGA GCTGCCTGAT GGCTGCAGCC ATGGGTTTGT GGTGGCGCGG GGGCGGTTTA
TGA
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| Protein sequence | MYLQHFGLRE MPFALTPNTG FFFALAPHAE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIL
RKLLNDLPAP LRCAYLPNPC LSPNELRWAL ALELGLKYSA NIDQQQLTSL IQHQLMALAA
HGHSVVLILD EAQALPQESL ETLRLFTNLE TESRKLLQVV LFGQPELDER LASPELRQLR
QRITFSYRLR PLNRQEIEAY VQHRLKVAGL SDTGLFDSAA IAAIARASRG IPRLINILAH
KALMLGFGEG LQRIGRRQAL GAIRDTEDAS KPIWPNWLPV LSLSCLMAAA MGLWWRGGGL
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