Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0425 |
Symbol | fre |
ID | 4602680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 521851 |
End bp | 522549 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779761 |
Product | FMN reductase |
Protein accession | YP_926305 |
Protein GI | 119773565 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCA TTCGTTGTAA AGTCCTCAGT ATCACGCCGT TCAACGACGC CGTGTATCAG GTTAGCCTGG CCCCGGAAAC GCCACTGGAG TTCAAGGCTG GCCAATACCT GTGCGTGGTG ATGGGTGAAA AGGACAAGCG CCCTTTCTCC ATCGCCTCGG CCCCCGGCAA TGACACTCTG GAGCTGCACA TAGGTGCTGC CGTCAGTGAA AGCTACCCCA TGCAGGTAGT GGAGCGCCTG AAGACCGAAA GCCATATCGA CATCGAAGCT CCGGGCGGTG ACGCCTTCCT GCGGGAAGAC AGTCATCGTC CACGCCTGCT TATCGCCGGT GGTACGGGTT TCTCTTATAT CAAGAGTATC GTCGAACAGC AGATTGCGCT GGGGCAAAAA GTCGAAACCA CTCTCTACTG GGGCTGCCGT ACCCAGGACG CCATGTATTA CGAGTCTATA GCCCGTCAAT GGCACCAGGA TTATCCCTGG TTGCACTTTG TACCCGTAGT AGAAGAGGCT TCTGAAGGCT GGGATGGCAA AACCAATAAC CTGCTGGCAC AAATCAAGGC CGATTTCATT AGCCTCGTCA GCTACGACAT CTACATTGCC GGTCGTTTCA ACATGGTCGG GGCCGCGCGG GAACAATTCC GCGAGATGGG TGTGGATGAA GCCCACCTGT ACGGTGATGC CTTCGCCTTT ATCAAGTAA
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Protein sequence | MNSIRCKVLS ITPFNDAVYQ VSLAPETPLE FKAGQYLCVV MGEKDKRPFS IASAPGNDTL ELHIGAAVSE SYPMQVVERL KTESHIDIEA PGGDAFLRED SHRPRLLIAG GTGFSYIKSI VEQQIALGQK VETTLYWGCR TQDAMYYESI ARQWHQDYPW LHFVPVVEEA SEGWDGKTNN LLAQIKADFI SLVSYDIYIA GRFNMVGAAR EQFREMGVDE AHLYGDAFAF IK
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