Gene Sama_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0425 
Symbolfre 
ID4602680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp521851 
End bp522549 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID639779761 
ProductFMN reductase 
Protein accessionYP_926305 
Protein GI119773565 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA TTCGTTGTAA AGTCCTCAGT ATCACGCCGT TCAACGACGC CGTGTATCAG 
GTTAGCCTGG CCCCGGAAAC GCCACTGGAG TTCAAGGCTG GCCAATACCT GTGCGTGGTG
ATGGGTGAAA AGGACAAGCG CCCTTTCTCC ATCGCCTCGG CCCCCGGCAA TGACACTCTG
GAGCTGCACA TAGGTGCTGC CGTCAGTGAA AGCTACCCCA TGCAGGTAGT GGAGCGCCTG
AAGACCGAAA GCCATATCGA CATCGAAGCT CCGGGCGGTG ACGCCTTCCT GCGGGAAGAC
AGTCATCGTC CACGCCTGCT TATCGCCGGT GGTACGGGTT TCTCTTATAT CAAGAGTATC
GTCGAACAGC AGATTGCGCT GGGGCAAAAA GTCGAAACCA CTCTCTACTG GGGCTGCCGT
ACCCAGGACG CCATGTATTA CGAGTCTATA GCCCGTCAAT GGCACCAGGA TTATCCCTGG
TTGCACTTTG TACCCGTAGT AGAAGAGGCT TCTGAAGGCT GGGATGGCAA AACCAATAAC
CTGCTGGCAC AAATCAAGGC CGATTTCATT AGCCTCGTCA GCTACGACAT CTACATTGCC
GGTCGTTTCA ACATGGTCGG GGCCGCGCGG GAACAATTCC GCGAGATGGG TGTGGATGAA
GCCCACCTGT ACGGTGATGC CTTCGCCTTT ATCAAGTAA
 
Protein sequence
MNSIRCKVLS ITPFNDAVYQ VSLAPETPLE FKAGQYLCVV MGEKDKRPFS IASAPGNDTL 
ELHIGAAVSE SYPMQVVERL KTESHIDIEA PGGDAFLRED SHRPRLLIAG GTGFSYIKSI
VEQQIALGQK VETTLYWGCR TQDAMYYESI ARQWHQDYPW LHFVPVVEEA SEGWDGKTNN
LLAQIKADFI SLVSYDIYIA GRFNMVGAAR EQFREMGVDE AHLYGDAFAF IK