Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0331 |
Symbol | |
ID | 4602587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 397426 |
End bp | 397959 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779660 |
Product | hypothetical protein |
Protein accession | YP_926212 |
Protein GI | 119773472 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000143905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGC AAAGCTTTAT ACTCACGCCA CTGGCGGGCA GCGCCCTCTG GGGCGCCATA GGCCTGCTGA TAGGGGTAAT ACTGATTGGT TTTTTTGCCA GACGTAAACC CATGACCAAA ACGGCCAGTG CCGTTGCCAC TGGCATTATT CTCGCTGTGG TTGGTCTGTT GGGGTGGATT TTCATTGGGG CTTTATCACC GGAGGCCCGC CTCGAGCAGG ATAAGTTGGT GCTGGACTTG CCCGCTTACA GCCGCATCAT TCCTGTATCT TCTTTACAGC TTGGTGAAGC TCGTGTGATG GCCACATCGG CTGCTGATGC GCCTAAACTG GGGTTTCGAA CAAACGGGGT CGGTACACCG GGCTACAATC TCGGTTGGTT TCGCCTCAAG GGGACTGACG CCAAGGCACT CGTCTCGGTG ACAGGCACAG ATCCCTTGTT GGTTATCCCG GTGGATGAGG GGTATACCCT GGTGCTGAGC ACACCAGATG GGGAGGCCTT GTTGGCCGCT TTGCATAACG AACAAGAACG CTGA
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Protein sequence | MTTQSFILTP LAGSALWGAI GLLIGVILIG FFARRKPMTK TASAVATGII LAVVGLLGWI FIGALSPEAR LEQDKLVLDL PAYSRIIPVS SLQLGEARVM ATSAADAPKL GFRTNGVGTP GYNLGWFRLK GTDAKALVSV TGTDPLLVIP VDEGYTLVLS TPDGEALLAA LHNEQER
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