Gene Sama_0322 details

Gene Information

• Locus tag: Sama_0322
• Symbol: folE
• ID: 4602578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella amazonensis SB2B
• Kingdom: Bacteria
• Replicon accession: NC_008700
• Strand: -
• Start bp: 389155
• End bp: 389805
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639779651
• Product: GTP cyclohydrolase I
• Protein accession: YP_926203
• Protein GI: 119773463
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0302] GTP cyclohydrolase I
• TIGRFAM ID: [TIGR00063] GTP cyclohydrolase I

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTCA GCGAAGCAGC ACAAAAGGTT CAGGCGGCGC TCTTGGAGCG GGGGCTGGAA 
ACTCCCATGG TTCCCTGCGG ACTCTCCCGC GAGGAACGCA AAGACAAAAT CGAACAGCAT 
ATGCGGGCAA TTCTTGGCCT GATGTCACTC GATTTGACCG ACGACAGCCT TGCCGATACC 
CCCCGTCGCA TCGCCAAAAT GTACGTGGAT GAAATCTTCT CTGGCCTCGA CTACGAGAAC 
TTCCCCAAAA TCACTGTCAT CGACAACAAG ATGGGCGTGG ATGAAATGGT ACGGGTACAG 
GATATCAGCC TGACCAGCAC CTGCGAACAC CATTTGGTGA CCATAGACGG CACTGCCACA 
GTGGCCTATC TGCCGCGTAA AAAAATCATC GGCCTGTCGA AAATCAACCG TATCGTGCGC 
TTCTTTGCCC AGCGCCCTCA GGTGCAGGAA CGCCTGACTC AACAGGTTCT GGTGGCACTG 
CAGGCACTGC TGGAAACCAA AGATGTGGCG GTGAAAATCG ATGCGGTGCA CTACTGCGTT 
AAATCCCGCG GCGTGATGGA TGCCACCAGC TCCACCACCA CCACGGCACT GGGTGGCATT 
TTCAAATCCA ACCCGGCCAC CCGGGCGGAA TTTTTACATC AGCCCCGCTG A 

 

Protein sequence

MALSEAAQKV QAALLERGLE TPMVPCGLSR EERKDKIEQH MRAILGLMSL DLTDDSLADT 
PRRIAKMYVD EIFSGLDYEN FPKITVIDNK MGVDEMVRVQ DISLTSTCEH HLVTIDGTAT 
VAYLPRKKII GLSKINRIVR FFAQRPQVQE RLTQQVLVAL QALLETKDVA VKIDAVHYCV 
KSRGVMDATS STTTTALGGI FKSNPATRAE FLHQPR