Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0282 |
Symbol | |
ID | 4602538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 330536 |
End bp | 331021 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639779611 |
Product | putative DNA mismatch endonuclease protein |
Protein accession | YP_926163 |
Protein GI | 119773423 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGGATA AGCGCAGCTA CAACATGTCC CGCATTCGGG GTGAGGATAC CCGCCCCGAG ATGTGGCTGA GGAAACGGAT CCATGCGTTG GGGTTTCGTT ATCGGCTGCA CGACAAACGT TTGCCGGGAA AACCTGATCT GGTTTTCCCT AAATACCGTG CCGTAATCTT TGTAAACGGC TGCTTCTGGC ACATGCATCA CTGCCGCTTC TTTCAATTTC CTGCGTCTTC CTCCACCAAA GGGCGTGGGC CACAGTGGTG GCGGGAGAAG CTCATCGGTA ATCGGCAGCG TGATCTTGAG AACATTGAAA AGTGTCGTGA GCTTAGATGG CGGGTATTGG TTTTGTGGGA GTGTGCGCTT AAGGGAACAG AAAAATTGCC TGAGCCGCAG GTTCTGCAGC AAATCACCCA GTGGCTTGAG TCCGGTTGCC ATTATCTGGA AATCCCGGCG CCGGATGCCA TTGGGCCCCG GTGTTCCACA AACTGA
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Protein sequence | MKDKRSYNMS RIRGEDTRPE MWLRKRIHAL GFRYRLHDKR LPGKPDLVFP KYRAVIFVNG CFWHMHHCRF FQFPASSSTK GRGPQWWREK LIGNRQRDLE NIEKCRELRW RVLVLWECAL KGTEKLPEPQ VLQQITQWLE SGCHYLEIPA PDAIGPRCST N
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