Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0242 |
Symbol | |
ID | 4602498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 267096 |
End bp | 267296 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639779563 |
Product | heme exporter protein CcmD |
Protein accession | YP_926123 |
Protein GI | 119773383 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0295502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000649691 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGTTTG AATCCTTTAC AGACTTTATC AACATGGGAG GCTACGCCTT CTATGTCTGG CTGGCTTATG GCGTTACTGC TACCAGCCTC GCGACCCTCA TCATTCTTAG CACGCGCCAA AAAGGCAAGG TGCTCACGGA GATCGCTAAG AAAATCGCTC GGGAAGAGCG CCTGAAAGAA AGCCGGAGCA ACAAAGCATG A
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Protein sequence | MQFESFTDFI NMGGYAFYVW LAYGVTATSL ATLIILSTRQ KGKVLTEIAK KIAREERLKE SRSNKA
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