Gene Sama_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0159 
Symbol 
ID4602416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp187894 
End bp188409 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content56% 
IMG OID639779471 
Producthypothetical protein 
Protein accessionYP_926041 
Protein GI119773301 
COG category[S] Function unknown 
COG ID[COG3860] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC CCATTCCGTT TGTGGCCGCC GACATCTCGG CATTGGCCAA GTCCCTTCGC 
AAGCAATTGA TGGCCTGCGA GCAATTCCCG ACCCATGTAG AAATGCTGAA CCTGCTTGCC
AAGGCCAGCG GGTATCAAAA CTTTCAGCAG TTTAAGGCGC AGCAGGTGCC AGTGGGCGCG
GATGCGTCAG GTGTTGACTC TTTGGCCGTG GATATTCCGG CCAAGCTGAA ACCCTTTATG
GACCAAGATT ATGTGCTCAG GCAATGGCCC GGCCGTTTTG CGTTGCAGCA ACAAAGTCTG
TGGTTTTTCT GGTGCCGTTT CCGCTATGGG GTAGAGTACA GCGAGGCCGA GGTGAATGCC
TTGCTCAAAC CCTTTATCGG ATTTGGGGAT CATCCCCTTA TCCGGCGGGA ACTGGTCAAC
AAGGCCCTGC TGGGACGCAC CGACGATGGT GGTCGTTATT GGCGCCAAAG CGCCATTCCA
CCTGCCGGAT TTGAGCGCTT GGCCGAAGTC TGGTGA
 
Protein sequence
MKQPIPFVAA DISALAKSLR KQLMACEQFP THVEMLNLLA KASGYQNFQQ FKAQQVPVGA 
DASGVDSLAV DIPAKLKPFM DQDYVLRQWP GRFALQQQSL WFFWCRFRYG VEYSEAEVNA
LLKPFIGFGD HPLIRRELVN KALLGRTDDG GRYWRQSAIP PAGFERLAEV W