Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0159 |
Symbol | |
ID | 4602416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 187894 |
End bp | 188409 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779471 |
Product | hypothetical protein |
Protein accession | YP_926041 |
Protein GI | 119773301 |
COG category | [S] Function unknown |
COG ID | [COG3860] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC CCATTCCGTT TGTGGCCGCC GACATCTCGG CATTGGCCAA GTCCCTTCGC AAGCAATTGA TGGCCTGCGA GCAATTCCCG ACCCATGTAG AAATGCTGAA CCTGCTTGCC AAGGCCAGCG GGTATCAAAA CTTTCAGCAG TTTAAGGCGC AGCAGGTGCC AGTGGGCGCG GATGCGTCAG GTGTTGACTC TTTGGCCGTG GATATTCCGG CCAAGCTGAA ACCCTTTATG GACCAAGATT ATGTGCTCAG GCAATGGCCC GGCCGTTTTG CGTTGCAGCA ACAAAGTCTG TGGTTTTTCT GGTGCCGTTT CCGCTATGGG GTAGAGTACA GCGAGGCCGA GGTGAATGCC TTGCTCAAAC CCTTTATCGG ATTTGGGGAT CATCCCCTTA TCCGGCGGGA ACTGGTCAAC AAGGCCCTGC TGGGACGCAC CGACGATGGT GGTCGTTATT GGCGCCAAAG CGCCATTCCA CCTGCCGGAT TTGAGCGCTT GGCCGAAGTC TGGTGA
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Protein sequence | MKQPIPFVAA DISALAKSLR KQLMACEQFP THVEMLNLLA KASGYQNFQQ FKAQQVPVGA DASGVDSLAV DIPAKLKPFM DQDYVLRQWP GRFALQQQSL WFFWCRFRYG VEYSEAEVNA LLKPFIGFGD HPLIRRELVN KALLGRTDDG GRYWRQSAIP PAGFERLAEV W
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