| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0125 |
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| Symbol | |
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| ID | 4602382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 138447 |
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| End bp | 139829 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779437 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_926007 |
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| Protein GI | 119773267 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.847419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA ACGAAGCCAT TGCAAAACCT CTGCCTACTG CCGTGTCTGT GCTGATTGTT
GATGATGAGC CGGGCATGCG TTCCTTTTTA AATAAGGCGC TGTCGAAAAA GTTCGCCCTG
GTGGAAACCG CCGGCAGCGT GGAAGAAGCA GAACAGCTCA GAAGTCGCTG CCACTTCGAT
TTGATCATTG TCGATATTCG TTTGCCGGGG CGTTCCGGTA TTGAATGGCA TGAAGCCCTG
TCGGACGAGG ACAGACGCTC AGACATTATT TTCATGACCG GCTATGCCGA TATGGAAGTG
GCCATTCAGG CGCTGCGGGC CGGAGCTTCC GACTTCATCA TGAAGCCGTT CCACCTGGAA
CAAATGCTAA AAGCGGTGGA CAGGGCCATA GAGCGCAGGC TGCTCAAGCG GGAAAACCTG
ATGCTGCGCC GCGAAGTGTC TATCGGTTAT TCCTCCAGCA TCATTGGCAA CAGTGCTGCC
ATGCAGGAAG TGAAAAACAT CATTGCCCGG GTGGCGCCCA CCAACGCCGT GGTGCTGATT
GAAGGCGAGT CAGGCACGGG CAAAGAGCTG GTGGCCAGAC AACTGCATCA ACTCTCTGGC
CGTCAGGGAC CCTTCGTGCC GGTTAACTGT GGTGCCATCG CCCCTGAACT GCTGGAGAGT
GAACTCTTTG GCCATGCAGC TGGCTCCTTT ACCGGCGCCA AGGGTGCCCG TGAAGGGCTG
TTCAGCTTTG CGTCGGGCGG CACCATCTTC CTCGATGAAA TCGGTGAAAT GCCGCTGAAG
ATGCAAACTG CGCTGCTTAG GGTGCTGGAG CAAAAAGCCA TCCGTCCTGT CGGCAGTGAA
AAAGAGGTCA GTATCGATGT GCGTGTGGTG GCTGCCACCA ACCGCAAGCT GGCTGATGAA
GTGGAAGCTG GACATTTCCG CCGCGATCTC TTCTATCGAT TGAACGTGCT CGAAATTCAA
ATACCGCCCC TGAGAGACCG ACCCGAAGAT GTCGTCGAGT TGACCCATCA CTTCACCCGG
GTGCTCGGGG CTGAGCTGGG TGTGCGTGAG CTGGTGTGGA GCCACGAAGA CTTAAGCCGC
CTTCAGCAAC ACGACTGGCC GGGGAATATC CGCGAACTGC GCAACATGAT TGAGCGCAGC
ATCCTCTTGG GTAAGCCCCC GGCGGAATAC TGGAAAACTA CCATCAAGGA AGTTGAACCG
GGTCAGTTTG GGTTCCCGCT GGAGTGGCCA CTCAAGGACG TGGAAAAACA TCATGTACTG
GCGGTGGTTG AGGCCCATGG TGGCAATAAG TCGGCAGCAG CCCGTGATTT GGGCGTATCC
CGCAAGACCC TGGATCGAAA ATTCAAAGAG TGGTTTGGCA CTGACAGTGA CGAGGAAGAA
TAA
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| Protein sequence | MNQNEAIAKP LPTAVSVLIV DDEPGMRSFL NKALSKKFAL VETAGSVEEA EQLRSRCHFD
LIIVDIRLPG RSGIEWHEAL SDEDRRSDII FMTGYADMEV AIQALRAGAS DFIMKPFHLE
QMLKAVDRAI ERRLLKRENL MLRREVSIGY SSSIIGNSAA MQEVKNIIAR VAPTNAVVLI
EGESGTGKEL VARQLHQLSG RQGPFVPVNC GAIAPELLES ELFGHAAGSF TGAKGAREGL
FSFASGGTIF LDEIGEMPLK MQTALLRVLE QKAIRPVGSE KEVSIDVRVV AATNRKLADE
VEAGHFRRDL FYRLNVLEIQ IPPLRDRPED VVELTHHFTR VLGAELGVRE LVWSHEDLSR
LQQHDWPGNI RELRNMIERS ILLGKPPAEY WKTTIKEVEP GQFGFPLEWP LKDVEKHHVL
AVVEAHGGNK SAAARDLGVS RKTLDRKFKE WFGTDSDEEE
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