Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0103 |
Symbol | |
ID | 4602360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 116150 |
End bp | 117250 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779415 |
Product | hypothetical protein |
Protein accession | YP_925985 |
Protein GI | 119773245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000146304 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTCAAT CAATGGCCCC AAACTCCGTG GTCACGCAAT CTATGGCTCC AAAATTTTTG TTTATCCCCG TCTCTTCTGC TGAAGGCATG GGGGAGTACA TGCGCTCGCT GATAGTGGCA GATGAAGTGA AGCGCTGCTG GCCAGCTGCC GAGGTGTGTT TCATTCTCAG CAAGGAAGCA CCTTACGCAG CCAGCTGCCC ATATCCAGCC AAACTGCTGG ACCGCACACC CACCAAAGAA GTGAAGGCCG TGAATGACAT CATGGAGACA TTTCGCCCCG ATGTGGTGCT CTTTGATGCG TCCGGCCGCA AGTCTCAGCT GGCACGGGCC CATGCCCTGG GCGCCAAAGT TGTGTTTTTC AGCCAGCACA GGCGCAAGCG CAGCCGTGGT ATGAAAATAG GCCGTGCCCG GGTGACGGAT GCCCATCTGG TCGTACAGCC GGAATTTGTG ATTGGTCCCG TTTCCGCTTT CGATGCTTTT AAGTTGAAAT TGATTGGTAA GCCGCTGCCT GAGTGTATTG GGCCTGTGTT CAGCGCGCCG GATAAGGCAA GACAGCAGCA ACTGCTCGCC CAATATGGTC TGGTCGACGG GGAGTTTGTG CTCTTTAACG CCGGCTCAGG TGGGCATAAG TTGGCCGGAG GCCTCGCAGC AGACCGTTTT TTTGAGGCAG CACAAGCCAG CTATGTCGCC AGTGGGCTCA AATCCGTCAT GGTGTTTGGT CCCAATTATC CCAAGGCATT ACCCGAGGCA TCGGGAGTGA TTTGTCTGAG CGCCCTGGCC AATAGTGACT TTATTAACTT GCTGGTGGCT GCCAAAGCGG CGGTGCTGAG CGGTGGTGAT ACCTTGCTGC AGGCTATCGC CTTGAAAAAG CTGGTACTGA CGGCTCCGGT TTCCAAAGAC CAGCCGCCGC GTATCGCTGT TTGTGCCGAC AGAGGGCTGG TGCTGGCCTG TGAGCCAGAG CAGCTTGCCG CCAACATTCC TGCTCTGTTT TCCGATGAAA CCACAGGGCC ACTGCAGCAG GCACTGGCAG CCGAAGCCGA TATGGACGGC CTGCAACTGA CCATGAATAA AATTAAGCAT TTGCTGGAGG TTCAGCCATG A
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Protein sequence | MTQSMAPNSV VTQSMAPKFL FIPVSSAEGM GEYMRSLIVA DEVKRCWPAA EVCFILSKEA PYAASCPYPA KLLDRTPTKE VKAVNDIMET FRPDVVLFDA SGRKSQLARA HALGAKVVFF SQHRRKRSRG MKIGRARVTD AHLVVQPEFV IGPVSAFDAF KLKLIGKPLP ECIGPVFSAP DKARQQQLLA QYGLVDGEFV LFNAGSGGHK LAGGLAADRF FEAAQASYVA SGLKSVMVFG PNYPKALPEA SGVICLSALA NSDFINLLVA AKAAVLSGGD TLLQAIALKK LVLTAPVSKD QPPRIAVCAD RGLVLACEPE QLAANIPALF SDETTGPLQQ ALAAEADMDG LQLTMNKIKH LLEVQP
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