| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0026 |
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| Symbol | glyQ |
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| ID | 4602283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 25552 |
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| End bp | 26457 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779335 |
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| Product | glycyl-tRNA synthetase subunit alpha |
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| Protein accession | YP_925908 |
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| Protein GI | 119773168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0127788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACGA AATACGACGT AAAGACATTC CAGGGCTTTA TTTTGACCCT GCAGGATTAC
TGGGCTCAGC AAGGCTGTGC CATTGTCCAA CCACTGGATA TGGAAGTCGG TGCCGGCACC
TTCCACCCTC AGACCTTCCT GCGCGCCCTC GGCCCTGAGC CAATGAGCAG CGCCTATGTG
CAGCCTTCAC GCCGCCCAAC CGATGGTCGC TACGGTGAAA ACCCAAACCG CCTACAGCAC
TACTACCAGT TCCAGGTCGT ATTGAAGCCA TCCCCTGACA ACATTCAGGA GCTCTACTTA
GGCTCGCTGC GAGCCTTGGG CATCGACACC CAAATCCACG ACATTCGCTT CGTGGAAGAC
AACTGGGAAT CGCCAACACT GGGCGCCTGG GGTCTGGGTT GGGAAGTCTG GCTCAACGGC
ATGGAAGTGA CTCAGTTTAC CTACTTCCAG CAAGTTGGCG GCATCGAATG CAGCCCAGTG
ACCGGTGAAA TCACCTATGG TCTGGAGCGT CTGGCCATGT ACATCCAGGG CGTAGACAGC
GTTTACGATC TGGTCTGGAC CGATGGCCCC ATGGGCCGCA TCACCTATGG CGATGTGTTC
CACCAGAACG AAGTTGAACA ATCTACCTAT AACTTTGAGC ACGCCGACGT GGACTTCCTG
TTCGGCATGT TCGACCAATG CGAAAAAGCC TGTCAGCATT TGTTGTCATT GGAAACTCCT
CTGCCTCTGC CCGCTTACGA GCAAGTCATG AAGGCCTCAC ACGCTTTCAA CCTGCTGGAT
GCCCGTCACG CCATTTCTGT GACCGAGCGT CAGCGCTACA TTCTGCGTGT GCGCACCATG
GCCAAGGCGG TTGCCGAAGC CTACTACAAG GCCCGTGAAG CCCTCGGCTT CCCCATGTGC
AAATAA
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| Protein sequence | MTTKYDVKTF QGFILTLQDY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRAL GPEPMSSAYV
QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLRALGIDT QIHDIRFVED
NWESPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGIECSPV TGEITYGLER LAMYIQGVDS
VYDLVWTDGP MGRITYGDVF HQNEVEQSTY NFEHADVDFL FGMFDQCEKA CQHLLSLETP
LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKAVAEAYYK AREALGFPMC
K
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