Gene Sala_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3179 
Symbol 
ID4082515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3337609 
End bp3337974 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content75% 
IMG OID638011564 
Producthypothetical protein 
Protein accessionYP_618215 
Protein GI103488654 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.734487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.169697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGC TGAACATCAT CGTCGCGGCG GCCGAGGGGC GGCGCTTTTG CGCCGCGCTC 
GAAACCGCGA TCGCCGCCGT CGCGCTGGGC CAGCGGGCGC GCCTGTTCTT GCAGGGCGAC
GCCGCCGCGC TGCTGCGCGC GCCCGCGGGC TTTGCGGGCG ACGACGCGCG GCGCGCGGCG
GGGCTGCCGG GCCTCGGCGA ACTGATCGAG GAAGCGCTGG CGAGCGGGAT CGAGATGGTC
GTGTGCCAGT CGGGGCTGGC GGTCGCGGGC CTCACTGCCG ACCGGGTCGT CGCGGGCGTC
AGGGCGGGCG GGGTCGTCAG TTTCCTGGCG GCGGTCGCGG CGGAGGATCA TATTCTGGTG
TATTGA
 
Protein sequence
MPGLNIIVAA AEGRRFCAAL ETAIAAVALG QRARLFLQGD AAALLRAPAG FAGDDARRAA 
GLPGLGELIE EALASGIEMV VCQSGLAVAG LTADRVVAGV RAGGVVSFLA AVAAEDHILV
Y