| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3105 |
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| Symbol | xseA |
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| ID | 4082841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3253329 |
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| End bp | 3254756 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638011491 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_618142 |
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| Protein GI | 103488581 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTC CTTTTCCCGA TGAGGCGCCC GGCGACGGCA CCGACGCGCG GCTGTTAGCC
GAGGCGGCGC CCGGCGACAA TGTGCCGCCG CTGTCCGTCA GCCAATTGTC GGCGGCAATC
AAGCGCACCG TCGAGGACGG TTTCGCGCGC GTGCGCGTGC GCGGCGAGCT GTCGGGGGCG
AAGCGCGCGG CATCGGGGCA TTTTTATGCG GCGCTGAAAG ACGACAATGC CCTCATCGAC
ATGGTGATGT GGAAGGGGCA GGCGGCGCGG CTCGCCTTCC GGCCCGAGGA CGGAATCGAG
GTGATCGCTA CGGGTAAGCT CACCACCTAT CCGGGGCGCT CCAAATATCA GCTCGTCGTC
GAAAGCCTGG AGGTCGCGGG CGAAGGCGCG CTGATGCTGC TCTTCGAGAA ATTGAAGGCG
CGGCTGGGCG GCGAGGGGCT GTTCGATCGC GACAGAAAGC AGCCGCTTCC CTATCTGCCG
CGCACGATCG GCGTCGTGAC CTCCCCCACC GGCGCGGTGA TCCGCGACAT TCTCCACCGC
CTCGCCGACC GCTGCCCCAG CCATGTGATC GTCTGGCCGG TGCTCGTGCA GGGCGAAGGC
GCCGCGGCGC AGGTCGCGGC GGCGATTCGC GGTTTCGACG CGCTCGCGCC CGGCGGGAAG
GTAGCCCGCC CCGACCTGGT GATCGTCGCG CGCGGCGGCG GGTCGATCGA GGATCTGTGG
GCGTTCAACG AGGAGGTCGT CGTGCGCGCG ATCGCCGATT GCCGCATCCC GACGATCAGC
GCGGTGGGGC ATGAAACCGA CGTGACGCTC GCCGACTATG CCGCCGATAT GCGCGCGCCG
ACGCCGACCG CCGCCGCCGA GATGGCGGTG CCGGTGCGCG CCGAACTGCA AGCGCAGCTG
GCGACGTGGG GCGGGCGGAT GATCGGCGCC GCGAACCGGC AGCAGGCTTT GCGGGGCGAG
CGGCTGACGG CGCTCGCGCG GCACCTGCCG CGGCGCGACG CGCTCTATGC GCCGCAGCGC
CAGCGGCTCG ACGATGTCGG CGAGCGGCTG GGCCGCGGAC AAAGGCAGCG GCTGGCGATG
CTGGGCGAGC GGCTTGGCGC GCGCGGCGCG GCGCTGCGCC CGGCCCTGCT TGCGCGCGCG
TGGGACCGCG ACCGCGCGAA GCTCGACGGG CTGGGGCGCC TGCTCGCCTC GCTCGACCCG
CGCGCACTCT TGTCGCGCGG CTATGCGATG GTGCGCGATG CTGGCGGAGC GATCGTGACC
AGCGCGGCGA AGGCGCGCGA CGCGGGGCAT CTGCGGCTCC AGTTCGCCGA CGGCGAGCTG
CCCGTGACGG TCGGGGAGGG GGGTGATCCG GCGCCATCGT CTGGACCGCG CCCGGCGCGC
AAGGCATCGC CATCTGCGCC GAAAGCGGGG CAGGGCGAGC TGTTCTGA
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| Protein sequence | MAVPFPDEAP GDGTDARLLA EAAPGDNVPP LSVSQLSAAI KRTVEDGFAR VRVRGELSGA
KRAASGHFYA ALKDDNALID MVMWKGQAAR LAFRPEDGIE VIATGKLTTY PGRSKYQLVV
ESLEVAGEGA LMLLFEKLKA RLGGEGLFDR DRKQPLPYLP RTIGVVTSPT GAVIRDILHR
LADRCPSHVI VWPVLVQGEG AAAQVAAAIR GFDALAPGGK VARPDLVIVA RGGGSIEDLW
AFNEEVVVRA IADCRIPTIS AVGHETDVTL ADYAADMRAP TPTAAAEMAV PVRAELQAQL
ATWGGRMIGA ANRQQALRGE RLTALARHLP RRDALYAPQR QRLDDVGERL GRGQRQRLAM
LGERLGARGA ALRPALLARA WDRDRAKLDG LGRLLASLDP RALLSRGYAM VRDAGGAIVT
SAAKARDAGH LRLQFADGEL PVTVGEGGDP APSSGPRPAR KASPSAPKAG QGELF
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