Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3077 |
Symbol | |
ID | 4083085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3228218 |
End bp | 3229399 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638011463 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_618114 |
Protein GI | 103488553 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAC TGGACGCGTT CCGCACCGAG GTGCGCGCAT GGCTGGCGGC GAATTGCCCC CCCGAAATGC GTGAGCCCGT GCGCGACGAG GATGATGTCT GCTGGGGCGG GCGCAAATGG GTGTTCAAGA ACGACGCCCA GAAGGCGTGG CTCGAAGCCT GCGTTTCCAA GGGCTATACC GTCCCTGACT GGCCCAAGGC CTATGGCGGC GCGGGCCTCA CCCCCGAACG GACCAAGATC CTCAAACAGG AAATGAAGCG CATCCATGCC CGCTCGCCGC TCGACAGCTT CGGCATCTGG ATGCTCGGCC CCGCGCTGCT CAAATTCGGC ACCGAGGAGC AGAAGGTCCA TTATCTGAAC CAGATCGCGC GCGGCGAAAT CCGCTGGTGC CAGGGCTATA GCGAACCCGG CGCGGGCAGC GATCTCGTCA GCTTGCAGAC CTTCGGCGAG GACAAGGGCG ATCACTGGGT CGTCAACGGC TCGAAGATCT GGACCAGCTA TGCCGACAAG GCCGACTGGA TCTTCTGCCT CGTCCGCACC GACAAGACGA ACAAATATCA GGGCATCACC TTCATGCTTT TCGACATGGA GAGCCCCGGC GTCACCACCA AGCCGATCCT GCTGATCTCC GGCAACTCGC CCTTCTGCGA GACTTTCTTC GACGATGTGA AGGTGCCCAA GACGCAATAT GTGGGCGAGA TCAACCGCGG CTGGGACGTC GCCAAATATC TGCTCGGCCA CGAACGCGAG ATGATTTCGG GCGGCGGTGC GGGCGGCGAC ATGGTCAGCG TCGGCGCGCT CTTCGCGAAA TCGCTCGGGC TCAACGACCG CGGCGAACTC GACGACCCCG TCCTGCGCGC CGAAATGGCG GCGTTCGACA CCGACGTCTT CGCCTATCGC GCGATGGGCG AGCGCTTCAT GGACATGTGG AAGACCGGCC GCGCGCATCC GGCCAGCTCG AACATGATGA AATATGTCGG GACCGAGCTC AACAAGCGTC GGCACGAACT GGTGATGGCG GGCGGCGGCA GCGACGCGCT CGAATGGGAC AGCGCCGAAA GCAGGGGCGG CGCCCGCGCG CGCAGCTGGC TGCGCACCAA GGCCAATTCG ATCGAGGGCG GGACGAGCGA AGTCATGCTC AACGTCATCG CCAAGCGCAT CCTGGAATTG CCGGGGGCGT AA
|
Protein sequence | MSELDAFRTE VRAWLAANCP PEMREPVRDE DDVCWGGRKW VFKNDAQKAW LEACVSKGYT VPDWPKAYGG AGLTPERTKI LKQEMKRIHA RSPLDSFGIW MLGPALLKFG TEEQKVHYLN QIARGEIRWC QGYSEPGAGS DLVSLQTFGE DKGDHWVVNG SKIWTSYADK ADWIFCLVRT DKTNKYQGIT FMLFDMESPG VTTKPILLIS GNSPFCETFF DDVKVPKTQY VGEINRGWDV AKYLLGHERE MISGGGAGGD MVSVGALFAK SLGLNDRGEL DDPVLRAEMA AFDTDVFAYR AMGERFMDMW KTGRAHPASS NMMKYVGTEL NKRRHELVMA GGGSDALEWD SAESRGGARA RSWLRTKANS IEGGTSEVML NVIAKRILEL PGA
|
| |