| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3037 |
|---|
| Symbol | |
|---|
| ID | 4083045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3183888 |
|---|
| End bp | 3185327 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638011423 |
|---|
| Product | carboxylesterase, type B |
|---|
| Protein accession | YP_618074 |
|---|
| Protein GI | 103488513 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2272] Carboxylesterase type B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.505408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.604257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCG CTGATCTGAC GCGCCGCGCG CTGCTCGCGG CGGGCGCGGT CGCCGCATTG
GCGCCGCCTA TTTTTGCGCA AGAAACGCGC GACGTCCGCG TTTTCAAGGG CATCCGCTAC
GCGGCGGCGC GGCGTTTCGA GGCGCCCGTC GCGCTGCCTG GCAACCGGAC CGCGCTGGGC
GACTTTGGCC CCGCCTGCCC GCAGCGCGGC GATCGCTATA CACCGCAGTC CGAAGACTGC
CTCTTCCTCA ACGTCTGGAC GCCCGCGGTG GCCGACGGTG CGAAGCGCCC GGTGATGGTC
TATTTCCACG GCGGCGCCTA TTCGACCGGC AGCGTCACCG ACCCGATCAA CGATGGCGCG
GCGCTCGCGG CGCGCGGCGA TGTCGTGGTG GTGACGGTCA ACCACCGGCT CAACGCGCTC
GGCTATCTCT ATCTCGCGCG GCTCGATCCG CGCTTTCCCG ACAGCGGCAA TGCGGGGCAG
CTCGACCTGA TCGCCGCGCT CCAATGGGTG CAGCGCAATA TCGCAGCCTT CGGCGGCGAT
CCCGCCAATG TCACTGTGTT CGGCCAGTCG GGCGGCGGCG CGAAGATCGC GACGCTGATG
GCGATGCCCG CCGCCAAGGG GCTTTTCCAC AAGGCGATCA CCATGAGCGG GCAGCAGGTT
ACCGTTTCGG GCCCGCTCAA CGCCACGAAG CGCGCCGAAG CCTTCCTCGC CCAGCTCGGC
AAGGGTGTCG ATCCCGCGAC CGCGCCCATC GGGCAACTGA TCGCCGCGCT GGAGGCGATC
GACCCTATCC TCGGCGGCTC CGTCTACATG GGCCCCGTGC TCGACATGAC GCATCTGACG
CGCCACCCCT TCTGGCCCGA CGCCGCGCCG CAGTCGCTCG CTATTCCGAT GATGCTCGGC
AACACGGTGA TGGAAACGCG CGCATTCTAC GCGCCCGATG GCAAGCAGCT TGCGGGGTTG
AACTTTGACA ATCTTGCGGC GCGCATCGCG CCCGAAATCA AGGTCGACGC GCATCCCGAA
TGGGTCGTGG GCCAGTTTCG CGCGCACTAT CCCAAGGCTG CCCCGATCGA GCTGTTCCAC
CGCATCGTCA CCGCGGGGCG GAGCTGGCGC GGGCAGGTCG AGGAGGCCGA GGCGCGTGCG
CGTGCCGGGG CACCGGCGCT CGTCTACCAG CTCGATTTCG AGGACGCCAA ACACACCGAC
GACATCGGTT TCGCCTTCGG CACCATCCCC GATCCAAGCC CGGCGCAGCA GGCGATGAGC
GACCGGATGA TGGATGCCTT CGTCCGTTTC GCGCGCACGG GCGATCCGGG CTGGCCCGCC
TACGACCTCG CCACGCGGCA GACGATGATC TTCGATCGCC TGAGCCGTGT CGAGAGCGAT
CCGCGCCGGT GGGAGCGCGA GCTGTTCGCG CGCGTGCCCT ATATCCAGCC GGGGAGTTAA
|
|---|
| Protein sequence | MSGADLTRRA LLAAGAVAAL APPIFAQETR DVRVFKGIRY AAARRFEAPV ALPGNRTALG
DFGPACPQRG DRYTPQSEDC LFLNVWTPAV ADGAKRPVMV YFHGGAYSTG SVTDPINDGA
ALAARGDVVV VTVNHRLNAL GYLYLARLDP RFPDSGNAGQ LDLIAALQWV QRNIAAFGGD
PANVTVFGQS GGGAKIATLM AMPAAKGLFH KAITMSGQQV TVSGPLNATK RAEAFLAQLG
KGVDPATAPI GQLIAALEAI DPILGGSVYM GPVLDMTHLT RHPFWPDAAP QSLAIPMMLG
NTVMETRAFY APDGKQLAGL NFDNLAARIA PEIKVDAHPE WVVGQFRAHY PKAAPIELFH
RIVTAGRSWR GQVEEAEARA RAGAPALVYQ LDFEDAKHTD DIGFAFGTIP DPSPAQQAMS
DRMMDAFVRF ARTGDPGWPA YDLATRQTMI FDRLSRVESD PRRWERELFA RVPYIQPGS
|
|---|
| |