Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2980 |
Symbol | |
ID | 4083063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3123537 |
End bp | 3124163 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011365 |
Product | ankyrin |
Protein accession | YP_618018 |
Protein GI | 103488457 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.362189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0382606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGCC GCGCCGCGTT CCGCCTTGCC GCTTTCGCTC TCGTCCCGCT TGCCGCCGCG GGGCTGGTCC ATGGCCCGGC GCAGGCGCAG TTCCGCGGCG GCTATGCCTT TCTGCAAGCG GTCGAGAATC GCGACGGGAA CAAGGCGACC TCCGCGCTCC AGGACGATCC GACGCTGATC AACACGCGCA ATGTGGACAC GGGCGAGACC GCGCTGATGA TCGTCACCAA GCGGCGCGAC ACCAGCTGGC TGCGCTTTCT GCTCGCCAAG GGCGCCGATC CGGCGATCGC CGACCGCAAT GGCATGACGC CGCTGATGCA TGCCGCGCTG CTCAACTATA CCGACGGAGC CGACGAATTG CTCAAGCAAA AGGCGCCGGT CGACCAGGCG AACCGGCGCG GCGAGACCGC GCTGATCCTG GCGGTGCAGT CCAAAAATGG CGCGATGGTC CGCCTGCTCA TGCGGCGCGG CGCCAATCCC GACAAGACCG ACCATGTCGC CGGCATGTCG GCGCGCGACT ATGCCAGGCG CGATGACCGG ACGGGCCAGC TGCTCGCGCT GCTCGACACA CAGGCCGATG CCGATGCGCC CAAGCGCGAA TATGGGCCGA CCTTTGGCCC CAATTAA
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Protein sequence | MFRRAAFRLA AFALVPLAAA GLVHGPAQAQ FRGGYAFLQA VENRDGNKAT SALQDDPTLI NTRNVDTGET ALMIVTKRRD TSWLRFLLAK GADPAIADRN GMTPLMHAAL LNYTDGADEL LKQKAPVDQA NRRGETALIL AVQSKNGAMV RLLMRRGANP DKTDHVAGMS ARDYARRDDR TGQLLALLDT QADADAPKRE YGPTFGPN
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