| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2915 |
|---|
| Symbol | |
|---|
| ID | 4081110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3062989 |
|---|
| End bp | 3063306 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638011300 |
|---|
| Product | peptidoglycan hydrolase |
|---|
| Protein accession | YP_617953 |
|---|
| Protein GI | 103488392 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3951] Rod binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC CGATTTCTTC CGCGTCGGCG ATGCCGACGC TGGCCGCCGG GGGCGGCGGT
GACGGCGGGC TGCGCAAGGC GGCCGAGGCG TTCGAGGCGG TGATCCTGCG CCAGCTGATG
GCGTCGATGC GGCAGGCAAA GCTCGGCGAT GACATCTTCG GGTCGAGCGC GACCGACAAT
TTTCGCGAAA TGGCCGATGC ACGCACCGCC GACAGCCTCG CCGCGATGCG CCAGTTCGGC
ATTGCCGACA TGGTCGAACG CCAGTTTCGC GGCCCGCCCG GCGCGTCCGT GGCCCGCTTT
GGCGGAGGCG GGCAATGA
|
|---|
| Protein sequence | MTNPISSASA MPTLAAGGGG DGGLRKAAEA FEAVILRQLM ASMRQAKLGD DIFGSSATDN
FREMADARTA DSLAAMRQFG IADMVERQFR GPPGASVARF GGGGQ
|
|---|
| |