Gene Sala_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2788 
Symbol 
ID4080369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2951214 
End bp2951636 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID638011172 
Producthypothetical protein 
Protein accessionYP_617826 
Protein GI103488265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.382318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTA GCCGTGCGAC GATGGACCGC ATAATGGATG AGCATTTCGC CTTTGAAATG 
CGTGACGATG TCGAGGGCGT GCTCGCGACG CTTGCCGAGG ACGTCGAGCA TGACATCGTC
GGCGCCCCGA CCGGCGCGAC CGAGGGGCGC GAGGCGGCAC GAGGCTTTTA CGAAGCGCTG
TTCTCGGATC TTGCCGACGG CCGGGTGACG ACGATCCGTC GCCTCTATGG CGATGATTTT
CTGATCGACG AATCGCAGTG GAGCGGCCGC GCGCCGGGCC GGCCGTTCGG CATTGCCGGC
GGCAACCGCC CCTTGTCGTT CCGCCTGCTG CACGTCGTCC AGTTTCGACC CAACGGTGCG
ATCGCGCGGG AAAATGTCTG GATCGACCTC GCTGCGATCC AGCAACAGCT CGCCTTGGGC
TGA
 
Protein sequence
MTLSRATMDR IMDEHFAFEM RDDVEGVLAT LAEDVEHDIV GAPTGATEGR EAARGFYEAL 
FSDLADGRVT TIRRLYGDDF LIDESQWSGR APGRPFGIAG GNRPLSFRLL HVVQFRPNGA
IARENVWIDL AAIQQQLALG