| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2739 |
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| Symbol | |
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| ID | 4082478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2886787 |
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| End bp | 2889549 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638011122 |
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| Product | helicase-like protein |
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| Protein accession | YP_617777 |
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| Protein GI | 103488216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCT CTTTCTCCCA GCCGGTCAAG GCTGTCCTTG GCCCCACCAA CACCGGCAAA
ACCCATTTGG CGGTCGAACG CCTGACGGCT CATGCAAGCG GCATGATCGG CTTTCCGCTG
CGCCTGCTCG CGCGCGAGGT CTATGACCGC GTCGTGGCGA TCAAGGGCGC GGCCGATGTC
GCGCTGATCA CCGGCGAGGA ACGGATCATG CCGGCGCAGG CCCGCTACCT GCTCGGCACG
ATGGAGGCGC TCCCCGTCGA GCGCGACGTC GCCTTCGTCG GAATCGACGA GGCGCAGCTC
GGCGCGGATC CCGAGCGCGG GCATGTCTTC ACCGACCGGC TGCTGCGCGC GCGCGGGCGC
GAGGAAACGA TGATCCTGGG ATCGGCGAGC ATCCGCGGTC TCGTCCGCGA CCTTGTGCCC
GACGCCGAGA TCGTCACGCG GCCGCGCTTT TCGACCCTGA GCTATGCCGG ATCGTCGAAG
CTCTCGCGCC TTCCCAAACG ATCGGCGATC GTCGCCTTTT CGGCCGAGGA AGTCTATGCG
ATCGCCGAGA TGCTGCGCCG CTTTTCCGGC GGCGCCGCGG TCGTCATGGG CGCGCTCAGC
CCCAGGACAC GCAATGCACA GGTCGCGATG TTCGAGGCGG GCGAGGTCGA TTATCTCGTC
GCCACCGACG CGATCGGCAT GGGGCTGAAC CTCGATGTCC GCCACGTCGC CTTTGCCAGC
CTGCAGAAGT TCGACGGCCG CCGCCTTCGC CGCCTGACCA TCGCTGAAAT GGCGCAGATC
GCCGGGCGCG CCGGGCGCCA TCAGCAGGAC GGCAGTTTCG GAACCGTCGG GTTGCCACAG
GGCGGTTTCA CGCCTGAGGA GATTGCCGCG ATCGAGGGGC ATCATTTCCC GCCGGTGCCG
AACCTGTTCT GGCGCGAGCC CAACCCGCGC TTCGGCTCGC TCGACCAGCT TCTCGCCGAC
CTCGCGCGAC CGCCGGTACA GGCCGGACTG CGCGCGGCTC CCGAAGCGGT CGACTTTGCC
GTGCTGAAGC ATCTGGCAAG CGACATGGAC GTGCGCGCGC GGGGCAGCGA TTTCGATGCC
GTCCAGCGCC TCTGGGACGT CTGCGGCCTT CCCGATTTCG AGCAACTGGG CGCGGAACAT
CACAGCCGCA CCGTGTTCAA GCTGTGGCAA TGGCGCACGA GCGGCGACGG GATGATCGAC
CCCGACTGGT TCGCGCGGCG TCTCGCCCGG CTCGACGATG TCGAGGGCGA TATCGACCAG
CTGGCGAGCC GCATCGCCGC GGTCCGCACG CTCTGCTTCA TCGCGCAGCG CGGCGACTGG
ATCGCGGGCG GCGCGGGCTG GGCCGAGCGG ACGCAGGCGC TCGAATCGCG GCTGTCCGAC
GCGCTGCACG CCGCGCTCGC GCAGCGCTTC GTCGACCGGC GCCTCGCGCT GCTGCTGCGC
GACGCGGGGC AACGCGGCAA CAGCCTGCCC GTCGCGGTCG GCGCCGACGG CACCGTCGCG
GTCGATGGCG AGCCGATCGG CACGCTGAGC GGCTTTCAGT TCAAGGTCGA TCCGGTGGCC
AAGGCGAGCG ATCACCGGAT GCTGCTCGCC GCAGCCGAAA AGCATTTGCG CGGCGAGCTG
GCGCGCCGCG CGATGGCGCT TGCCGAAGGC GACGACAGCG CGCTGTCGCT GGTCGCTGAA
CCGGGGAGCC CGCCGCGCCT TGCCTGGCAC GGCCATGTCA TCGCCACGCT CGCGCGCGGG
CCGACGCTGG TTCAGCCGGC GATCCAGCTC GACCCTTCGC TGCGTCGGCT CGAACCTGCA
CAGGTGCAGG CAATGGCCGA CCGGCTCCAG CGCTTCGTCG CCAGCCAGCT CGCGCGCCAC
GCCGCCCCGC TCGCGGCGAT GGGGGAGGCC GCGGGCGACC TGTTCACCCC GCCGCGCGTC
CGCGCGCTGC TTGCCGCGCT CACCGACAAC AGCGGCACGA TCGGCCGCGC GGCGGTCGAG
GAGCAATTGA CCGCGCTGAC CGCCGACGAA CGGCCACTGC TGCGAAAACT GGGCCTCACG
ATCGGTTCGC TCGACATTTT CCACCCGCAG CTGCTGAAGC CCGAGGCGGT GCGCTGGCGC
GCGGCATTGA TCGCGGCGCA GCAGGGAAGC CCGATTCCGC CGCTGCCGCC GCACGGCGCG
GTACTCCAGA AAAGCGGCAG CCACGCCGGG CTGGCCATCG CGGGGTTTCG CCGTTGCGCG
TCGGGCTGGC TGCGCATCGA CATGGCCGAA AAACTCGCGC GGCAGGCGCA TGCCGCGCGG
ATGCAGGCCG CGGCGCCACC GACCGCACCG ATTGCCGGTG GCGATGATCA TCATCACGAC
GACGCCGCAG AAGAGGGGCA TGGCGCGCTG CCGTCCGGCT TCGTGATCGA TCCCGCGCTC
GCCACCTCGC TCGGTCTCGA CGAGGAAACG CGCCGCGCAC TGCTCGGCAG TTTCGGCTTT
CGCAGCGTCG GCGAACCGGC GTTGCAGCGC TGGCGCTGGT CGGGACTGCG CAAGGCGGCA
GACAAACGCC ACCGACGCAA GACGCGCGGC AAGACCGCCG ACGCGCCGCC GCAGGCCAAG
GTGAATGGCG ATGCGCGCCG CACGCCGACG AAGCAGGCGA AGGCGAAGCG GGCCAAGCCC
GGCAATCCGC GCGGCGACAC CCCGCGCCCG CCGCGGCGCG ACCGGCCCGA CCGGCGCGGC
CCCTCGCCCA ACAGCCCCTT CGCGGGCCTC GCCGCGCTGC TAGCCGACGC GCGCAAGGAC
TGA
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| Protein sequence | MTPSFSQPVK AVLGPTNTGK THLAVERLTA HASGMIGFPL RLLAREVYDR VVAIKGAADV
ALITGEERIM PAQARYLLGT MEALPVERDV AFVGIDEAQL GADPERGHVF TDRLLRARGR
EETMILGSAS IRGLVRDLVP DAEIVTRPRF STLSYAGSSK LSRLPKRSAI VAFSAEEVYA
IAEMLRRFSG GAAVVMGALS PRTRNAQVAM FEAGEVDYLV ATDAIGMGLN LDVRHVAFAS
LQKFDGRRLR RLTIAEMAQI AGRAGRHQQD GSFGTVGLPQ GGFTPEEIAA IEGHHFPPVP
NLFWREPNPR FGSLDQLLAD LARPPVQAGL RAAPEAVDFA VLKHLASDMD VRARGSDFDA
VQRLWDVCGL PDFEQLGAEH HSRTVFKLWQ WRTSGDGMID PDWFARRLAR LDDVEGDIDQ
LASRIAAVRT LCFIAQRGDW IAGGAGWAER TQALESRLSD ALHAALAQRF VDRRLALLLR
DAGQRGNSLP VAVGADGTVA VDGEPIGTLS GFQFKVDPVA KASDHRMLLA AAEKHLRGEL
ARRAMALAEG DDSALSLVAE PGSPPRLAWH GHVIATLARG PTLVQPAIQL DPSLRRLEPA
QVQAMADRLQ RFVASQLARH AAPLAAMGEA AGDLFTPPRV RALLAALTDN SGTIGRAAVE
EQLTALTADE RPLLRKLGLT IGSLDIFHPQ LLKPEAVRWR AALIAAQQGS PIPPLPPHGA
VLQKSGSHAG LAIAGFRRCA SGWLRIDMAE KLARQAHAAR MQAAAPPTAP IAGGDDHHHD
DAAEEGHGAL PSGFVIDPAL ATSLGLDEET RRALLGSFGF RSVGEPALQR WRWSGLRKAA
DKRHRRKTRG KTADAPPQAK VNGDARRTPT KQAKAKRAKP GNPRGDTPRP PRRDRPDRRG
PSPNSPFAGL AALLADARKD
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