| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2716 |
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| Symbol | |
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| ID | 4082417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2863914 |
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| End bp | 2865995 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011099 |
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| Product | peptidase M61 |
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| Protein accession | YP_617754 |
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| Protein GI | 103488193 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.944293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGCTT GCTGGCTCAG TCGCAGCGGG TGGGGGCCAT CGGCCTTGCG CAAGGCCGAT
GGCCCCCGCC CCAACCCCTC CCCTGAAGGA GAGGGGCTTT CTCTGGACCT CCACCTTCAT
CCCTGTCTAA AGAATGCCAC CATGAAAACA GCACCGTTCG TCGCCGCCGT GCTCCTGGCC
GCCCCGCTCG TCCTTGTCAC CGCCGCGTCA GCGCAAGACG GCAACAGCCG CCCGCAACCG
GTCGTCCAGC CGCTGACCAT CCCGTTGCCC GCCGACCGGC CCTATCCGGG CACGATGCAG
CTTCGCGTCG ATGCGACCGA CGTCGCGCGG GGCATTTTTC ATGTCCGCCA GACGATCCCC
GTCGCAAAAC CCGGCAAGCT GACTTTGCTC TATCCCCAAT GGCTGCCCGG CAAACATGCG
CCGCGCGGCG CGATCGCCGA GATGGCGGGC TTCACCGCGT CGGCGGGCGG CAAGCCGCTC
GCCTGGACGC GCCAGCCGAC CGACGTTTAT GCGTTCGACA TCGACGTGCC CGCAGGCACG
AAGAGCATCG AGGTCGCGTT CGATTTCCTG TCGCCGACGC GCAGCAGCGA AGGCCGCGTC
GTCGTCACCC CGGCGATGAT GAATTTGCAG TGGGAGCAGG TGAGCCTCTA TCCCGCGGGC
TGGTTCACGC GGAACATCCC GGTGCAGCTC GACGTGACGC TGCCCGAAGG CTGGACCGGC
GTGGCGGCGC TCGACGGGCT CAAGACCAGC GGCAATCGCT ACAGCTATGC GCCGACGAAT
TACGAGGTGC TGATCGACAG CCCCATGTTC GCGGGACGCC ATTTCCGCAA ATGGGATCTG
GGCCACAATG TCACGCTCAA CGTCGTCGCC GATGAGCCGC ACTATCTCGC CGCCAGCCCC
GACCATATCG CGCGCCACGC CGCGCTGGTG GCAGAAGCGG TGGCGCTGTT CGGCTCCCGT
CCTTTCGACC GCTACGAGTT TCTGCTCGCG CTCACCGACG AACTCGGCGG CATCGGGCTC
GAGCATCACC GGTCGAGCGA GAACAGCCGC GCGGTCGATT ATTTCACCAA ATGGGACGAG
AATGACTGGG AGCGCGGTCT GCTCCCGCAC GAACTGGTCC ATAGCTGGAA CGGCAAATAC
CGCCGTCCCG ACAAGCTGTG GACCCCCGAT TATCGCACGC CGATGCAGGA CAATCTGCTG
TGGGTGTACG AAGGCCAGAC GAGCTATTGG GATCTCGTCC TCGCGGGCCG GTCGGGGATG
CAGTCGAAAG AGACGATCCT CGGCGAATGG GCGAGCCATG CCGCCAACTA CAGCGTTCAG
CCGGGGCGCC GCTGGCGCTC GGTCGAGGAC ACCACACTCG ACCCGATCAT CGCCGCGCGC
AAGCCCAAGC CCTTCGCGAG CTGGTCGCGG ACCGAGGATT ATTACAACGA AGGATCGCTG
ATGTGGCTGG AGGCCGACAT GCTGATCCGC GGCGCCACGA ACAATCGCAA AAGCCTCGAC
GATTTTGCGC GCGCCTTTTT CGGCGGGCGC GAGGGCGACT GGGGGCAGGT GACATATGAT
TTCGGCGATG TCGTCGCGGC GCTGAACGCG GTCCACGCTT ATGACTGGGA ACGTTTCCTG
CGCGACCGGA TGCAGGCGTC AGGCCGCCCC GCGCCCACCG GCGGGATCGA GCGTGCGGGT
TATCGCCTCG TGTGGCGCGA CACGCCGAAC GCCTATGACC GCGACCGGAT GGCGCAGGGG
AAAAATGTCG ACCTCACCCA TTCGCTCGGC CTGACGATCG ACAAGGACGG GATTGCGGGC
AATATCTTGT GGGACGGCCC GGCCTTCCGC GCCGATATCG TCAACGGGAC CAGGATCGTC
GCGGTCGACG GTGTCGCCTA TGGCAAGGAG CGGATCGAAG CGGCGATCAA GGCTGCGGCG
AGCGACAGCA AGACGCCGGT GCGCCTGCTC GTCGAGCGTG GCGGGCGCTA TCGCACGGTC
GAGATCGCCT ATCATGGCGG GCTGCGCTGG CCGCATCTGG AAAAGGTCGC GGACACGCCC
GACGGGTTCG ACCGGCTGTT CGCGCCGAAA CGCGCACTCT AG
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| Protein sequence | MPACWLSRSG WGPSALRKAD GPRPNPSPEG EGLSLDLHLH PCLKNATMKT APFVAAVLLA
APLVLVTAAS AQDGNSRPQP VVQPLTIPLP ADRPYPGTMQ LRVDATDVAR GIFHVRQTIP
VAKPGKLTLL YPQWLPGKHA PRGAIAEMAG FTASAGGKPL AWTRQPTDVY AFDIDVPAGT
KSIEVAFDFL SPTRSSEGRV VVTPAMMNLQ WEQVSLYPAG WFTRNIPVQL DVTLPEGWTG
VAALDGLKTS GNRYSYAPTN YEVLIDSPMF AGRHFRKWDL GHNVTLNVVA DEPHYLAASP
DHIARHAALV AEAVALFGSR PFDRYEFLLA LTDELGGIGL EHHRSSENSR AVDYFTKWDE
NDWERGLLPH ELVHSWNGKY RRPDKLWTPD YRTPMQDNLL WVYEGQTSYW DLVLAGRSGM
QSKETILGEW ASHAANYSVQ PGRRWRSVED TTLDPIIAAR KPKPFASWSR TEDYYNEGSL
MWLEADMLIR GATNNRKSLD DFARAFFGGR EGDWGQVTYD FGDVVAALNA VHAYDWERFL
RDRMQASGRP APTGGIERAG YRLVWRDTPN AYDRDRMAQG KNVDLTHSLG LTIDKDGIAG
NILWDGPAFR ADIVNGTRIV AVDGVAYGKE RIEAAIKAAA SDSKTPVRLL VERGGRYRTV
EIAYHGGLRW PHLEKVADTP DGFDRLFAPK RAL
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