| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2701 |
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| Symbol | |
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| ID | 4081910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2842851 |
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| End bp | 2845004 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011078 |
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| Product | pyridine nucleotide-disulphide oxidoreductase dimerisation region |
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| Protein accession | YP_617739 |
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| Protein GI | 103488178 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.418324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.488956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC GTCTCATCCT GCTGCTGCTT GTCGCGCTGG CATTTGGTGC ATGGGTGTAT
TTCGACCTCG GCGACTGGCT GACCCTCGAG GCGCTGAAAT CGCAGCAGGC GGCGATCGAC
GGCTATTTTC GCGCCAATCC GCTGCTCGTG GCGGGACTGT TTTTCGTCGT CTATGTGGTG
TTGACGGCGC TCTCGGTTCC CGGCGCGGCG ATATTGACGC TCGCGGCGGG GGCGATCTTC
GGCCTCTACT GGGGAACGCT GATCGTCTCC TTTGCCTCGA CGATCGGCGC GACCTTCGCG
TTCCTCGCCT CGCGCTATCT CTTCCGCGAC GCCGTGCAGG CGCGCTTCGG CGACCGGTTG
CGGCGCGTCA ATGATGGCAT CGCGCGCGAC GGTGCCTTCT ATCTGTTCTC GCTGCGGCTC
GTTCCGGTAT TTCCTTTCTT CGCGGTCAAT CTGCTGATGG GGCTGACGCC GATCCGCACC
GTCACCTATT TCTGGGTCAG CCAGCTCGGC ATGTTCCTCG GGACCGTCAT CTATGTGAAT
GCAGGCACCC AGCTTGCGCG CATCGATGCG CTGTCCGACA TCGCTTCGCC GGGGCTGCTC
GCTTCCTTCG CCGCGCTCGG CCTGCTGCCC TGGCTCGGCA AATGGATCAT GGCGGCGATC
AAGCGCCGCC GTGTATATGG GCGTTTCCGC CGCCCGCGCC GCTACGATCG CAATCTCGTC
GTGATCGGCG CCGGGGCGGC GGGACTGGTA TCCTCCTATA TCGCCGCGAC GGTGAAGGCG
AAGGTGACGC TCGTCGAGGC CTCGAAAATG GGCGGCGATT GCCTCAACTA TGGCTGCGTG
CCGTCAAAGG CGCTGATCAA GTCGGCCCGC ATTGCGGAGC AGATGCGACA TGCGGATCGC
TACGGACTTG TCGCCGCATC GCCCCAGATT CGCTTCCGCT CGGTGATGCA GCGCATCCAC
GACATCATCG CCGCGATCGA GCCGCACGAC AGCGTCGAGC GCTATACCGA GCTTGGGGTC
GATGTGGTGC AAGGCTATGC CCGTATCGTC GATCCCTGGA CGGTCGAAAT CGCGCGCAAC
GACGGCGAAG TCCAGCGGCT CACGACCCGC GCGATCGTCG TCGCGGCGGG CGCCGAGCCG
GTCGTCCCCG ACCTGCCGGG GCTAGCGGAG TCGGGGTATC TGACCAGCGA TACGCTGTGG
GAGGCATTTG CGGCGCGCGA CACGATGCCG CAGCGCATCG TCATCCTGGG CGGCGGACCG
ATCGGATCGG AACTGTCGCA GGCTTTCGCG CGGCTCGGTG CCGATGTCGC GCAGATCGAA
CGCGGTGATC GCCTGCTGCC ACGCGAGGAT GATGAGGTGT CCGAACTGGC GCGCGATGCG
CTGGAAAACG CCGGAGTCGA AGTCCTGACC GGGCACGAAG CGCTGCGCGT GGAAGGGATC
GAGGCTGACC GGCGGCTGAT TGTCCGCCAC GCCGGCGGCG AGCGCGCGAT CGCCTTCGAC
GCGCTGATCG TCGCGGTCGG GCGCAAGGCA CGCCTGACCG GCTATGGGCT CGAGGATCTT
GGCATCGAAA CGCAGCGCAC GGTCGTGACC GACGAATATC TCGCAACCGT TTATCCCAAT
ATCTATGCTG CGGGCGACGT CGCCGGACCC TATCAGTTCA CGCACAGCGC GGCGCACCAG
GCCTGGTATG CCAGCGTCAA CGCGCTCTTC GGCCAGTTCC GACGTTTCAA GGCCGACTAT
CGTGTGATCC CCTGGACAAC TTTCATCGAC CCAGAGGTCG CGCGGGTCGG GCTCAGCGAG
GCCGAGGCGG TCGAGAAGGG CGTGGCGTTC GAGGTCACGC GCTACCCGCT CCACGACCTC
GACCGTGCGA TTGCGGACTC GGCGACGACG GGCTTCGTCA AGGTCCTGAC CCCGCCCGGC
AAGGACCGCA TCCTCGGCGT GACGATCGTC GGCGAACATG CCGGCGAACT GCTCGCCGAA
TATGTGCTTG CCATGAAGCA TGGTCTCGGT CTCGGAAAGA TCCTCGGCAC CATCCACACC
TATCCGACGA TGGCCGAGGC GAACAAATAT GCCGCAGGCG AATGGAAGCG GGCGCATGCG
CCCGAACGCC TGCTCAAGCT GGTCGGGCGT TATCACGACT GGCGACGCGG ATAA
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| Protein sequence | MNKRLILLLL VALAFGAWVY FDLGDWLTLE ALKSQQAAID GYFRANPLLV AGLFFVVYVV
LTALSVPGAA ILTLAAGAIF GLYWGTLIVS FASTIGATFA FLASRYLFRD AVQARFGDRL
RRVNDGIARD GAFYLFSLRL VPVFPFFAVN LLMGLTPIRT VTYFWVSQLG MFLGTVIYVN
AGTQLARIDA LSDIASPGLL ASFAALGLLP WLGKWIMAAI KRRRVYGRFR RPRRYDRNLV
VIGAGAAGLV SSYIAATVKA KVTLVEASKM GGDCLNYGCV PSKALIKSAR IAEQMRHADR
YGLVAASPQI RFRSVMQRIH DIIAAIEPHD SVERYTELGV DVVQGYARIV DPWTVEIARN
DGEVQRLTTR AIVVAAGAEP VVPDLPGLAE SGYLTSDTLW EAFAARDTMP QRIVILGGGP
IGSELSQAFA RLGADVAQIE RGDRLLPRED DEVSELARDA LENAGVEVLT GHEALRVEGI
EADRRLIVRH AGGERAIAFD ALIVAVGRKA RLTGYGLEDL GIETQRTVVT DEYLATVYPN
IYAAGDVAGP YQFTHSAAHQ AWYASVNALF GQFRRFKADY RVIPWTTFID PEVARVGLSE
AEAVEKGVAF EVTRYPLHDL DRAIADSATT GFVKVLTPPG KDRILGVTIV GEHAGELLAE
YVLAMKHGLG LGKILGTIHT YPTMAEANKY AAGEWKRAHA PERLLKLVGR YHDWRRG
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