| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2677 |
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| Symbol | |
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| ID | 4081828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2822946 |
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| End bp | 2825048 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638011054 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_617715 |
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| Protein GI | 103488154 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.525072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGGTGA TGCTGAGGCA ATATGAACTT GTCGAGCGCG TGCGCGCCTA TGATCCCGAC
GTCGACGAGG CGCTGCTCAA CCGCGCCTAT GTCTTTACGG TGCAAAAGCA CGGCAGCCAG
AAGCGCGCCT CGGGCGACCC CTATTTCAGC CATCCGGTTG AGGTCGCGGG GATTTTGACC
GACCTGCATC TCGACAGCGA AACGATCGTC ACCGCGCTGC TCCACGACAC GCTTGAGGAT
ACGCTGACGA CGCCCGAGGA GATCGAACGC CTGTTCGGCC CCGACGTCGG GCGGCTGGTC
GATGGCGTGA CCAAATTGAG CAAGATCGAG GCGCAAACCG AAAACGAGCG CGCCGCGGAA
AATCTGCGCA AGTTCCTGCT CGCCATGTCC GACGACATCC GCGTGCTGCT CGTCAAGCTC
GCCGACCGGC TGCACAATAT GCGCACGCTG CACTTCATCC AGAACCCCGA AAAAAGACGG
CGCATCGCCA GGGAGACGAT GGACATCTAT GCCCCGCTCG CCGAGCGGAT CGGCATGTAC
GAATATATGC GCGAAATGCA GTTGCTGGCG TTCCGCGAGC TCGAACCCGA AGCCTATGCG
ACGATCACCG GCCGCCTCGC CAAGCTGACC GCCGGCGGCA AGGACAAGGT CGCCGCGATC
AGCCGCGAGT TCAGGGAGCT GCTGTCCGCC GCGGGGATCG AGGCCGAGGT ATCGGGGCGC
GAGAAGCATC CCTACTCGAT CTGGCGCAAG ATGCAGGAGC GCCACGTCAG TTTCGAGCAG
GTGACCGACA TCATCGCCTT TCGCATCGTC ACCCCGACCG ACGCCGACTG CTATGCCGCG
CTGGGGCTGA TCCACCGCAA GTGGAAAATG GTGCCGGGCC GCTTCAAGGA CTATATCTCG
ACCCCCAAGC GCAACGGATA CAAGTCGCTG CACACGACGA TCATGCACCA GCAGAATATG
CGGATCGAAA TCCAGATCCG CAGCGTCGGG ATGCATCAGC AGTCCGAATT CGGCCTCGCC
GCGCACTGGG CGTACAAGCA GGGCGGCAGC GGCCCCGACG GGCAGGCGGG GTGGATCCGC
GACCTCATCG AAATCCTCGA ACAGACGCAC GACCCCGACG AGCTGCTCGA AAACACGCGC
ATCGCGATGT ATCAGGATCG CATCTTTGCC TTTACCCCCA AGGGCAGCCT GCACCAGCTG
CCCAAGGGCG CAACGCCGGT CGATTTCGCT TATGCCGTCC ACACCGGGCT CGGCGACCGC
ACCGTCGGGG CCAAGGTCAA CGGGCGGCTT GTCCCGCTGC GTACGCAGCT TGTCAATGGC
GATACGGTCG AAATCCTGTC GTCGGACAAA CAGACGCCGC AGCCCGCCTG GCTCGGCTTT
GCGGTCACCG GCAAGGCGCG CGCGGCGATC CGCCGCCACG TCCGTTCAAA GGAAAAGGTC
GAACTCGCGG CTTTGGGTCG CAAGATGTAC GACGAGATCG CCCGCCGCCT GCCGAACAAG
GTCGGCGACA AGGCGCGTGC CGCGGCGTTG ACGCGCTTGA AACTCGAAGA CGACAGCGCA
CTCTATATCG CGATCGCCAA GCAGCGGCTG ACAGACGACG CGGTGCTCGA GGCGCTGGTG
CCCGGCATCA CTGCCGAGAT GAAGACCAAA CCCGGCAAGC TTGTCCAGGG CGCGGCGGTG
TCGATTGCAG GATTGACGCC CGGCGTCGCC TATCAGCTCG CCGATTGCTG CCACCCGGTG
CCCGGCGACC GGATCGTCGG CCTGTCGCGT CCCGGCGAAG GGATCGAGGT GCATGTCATT
GATTGCCCCA GCCTCGCCGA TGGCGTCGAT GCCGACTGGA TCGACCTGCG CTGGCAGGAG
GACAGCGAGG GCGGCAATGC ACGGCTGTGC ATCGTCATCC TGAACGAGCC GGGAACGCTG
GCCGAAATGT CGGGTATCCT TGCCGCCAAT ATGGCGAACA TCACCAATTT GCGCCTGTCG
AACCGCGAGG GCGGATTCCA CACCTATGAC GTCGTCGTCG AGGTGCGCGA CGTCCAGCAC
CTGATGCGCA TATTGTCGGC GCTGCGCGCG TCGGACAGCG TCGTGCAGGC CGAGCGGTTA
TAG
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| Protein sequence | MRVMLRQYEL VERVRAYDPD VDEALLNRAY VFTVQKHGSQ KRASGDPYFS HPVEVAGILT
DLHLDSETIV TALLHDTLED TLTTPEEIER LFGPDVGRLV DGVTKLSKIE AQTENERAAE
NLRKFLLAMS DDIRVLLVKL ADRLHNMRTL HFIQNPEKRR RIARETMDIY APLAERIGMY
EYMREMQLLA FRELEPEAYA TITGRLAKLT AGGKDKVAAI SREFRELLSA AGIEAEVSGR
EKHPYSIWRK MQERHVSFEQ VTDIIAFRIV TPTDADCYAA LGLIHRKWKM VPGRFKDYIS
TPKRNGYKSL HTTIMHQQNM RIEIQIRSVG MHQQSEFGLA AHWAYKQGGS GPDGQAGWIR
DLIEILEQTH DPDELLENTR IAMYQDRIFA FTPKGSLHQL PKGATPVDFA YAVHTGLGDR
TVGAKVNGRL VPLRTQLVNG DTVEILSSDK QTPQPAWLGF AVTGKARAAI RRHVRSKEKV
ELAALGRKMY DEIARRLPNK VGDKARAAAL TRLKLEDDSA LYIAIAKQRL TDDAVLEALV
PGITAEMKTK PGKLVQGAAV SIAGLTPGVA YQLADCCHPV PGDRIVGLSR PGEGIEVHVI
DCPSLADGVD ADWIDLRWQE DSEGGNARLC IVILNEPGTL AEMSGILAAN MANITNLRLS
NREGGFHTYD VVVEVRDVQH LMRILSALRA SDSVVQAERL
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