| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2568 |
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| Symbol | |
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| ID | 4081601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2706300 |
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| End bp | 2707469 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010945 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_617607 |
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| Protein GI | 103488046 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.363903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC GTTACATAGC GGCCTTGCCG CTGACATTCG CCGCACTCCT TATGGTTGGA
TGTTCCGGCG GCGATCAACC CGCCGACAAT GCGCAGAACG CCGCTACGGC CGAAAAAGGC
GCCGCGCCCG AGGCGGGCGG CCATGCCGAA GAAGAAGGCG AGATCGAACT TAGCGCGGAT
CAGATTCGCA AAGCTGGCAT CGAAATGGTG CGCGTTATCC GCAGCGGCGG CGGCGCGCTC
ACGCTGCCGG CGACGATCGA AGGCGACCCC CAAGGGATGC AGGTTGTGTC CGCCGCGATC
GGCGGGCGTG TCGTGTCGCT AACGCGCAAT CTCGGCCAGT TGGTCGGGCG CGGGCAAACT
CTGGCGATCA TCGAAAGCCG CGAGGCGGCG ACGCTCAACG CGGAGATCGA GGCGGCGCGG
GCAAGGCTGG CGCTCGCCGA AAGCAACCTT CGCCGCGAAC AGCGCTTGTT CAACGAGCGC
GTCTCACCGG AACAGGATCT GATCGCCGCG CGCACCGCAG CGACCGAAGC GCGAATCGCC
CTGCGCCTCG CACAGCAACA GGTGTCAGCC GCCGGCGGCG GTGGCGGCGC GCTCAATCGC
ATCGCGATCA ATGCTCCCCT TTCGGGCCAG GTCGTCGCGC GCAGCGTGAC CCTGGGCCAG
ACCGTCGCCG CCGACGCCGA ACTGTTCCGC GTCGCCAATC TTGGACGGGT CGCGGTTACG
CTGGCACTTT CGCCGGCCGA CGCCGGCAAA GTGCTGCCCG GCTCGCAAAT CGAAGTCGTC
GCGGGCGATC GGCGATCGGT TGCGCGCGTC GATTTCGTGT CGCCCATTCT CGATGAAGCC
ACGCGCCTCG CCACGGTCAT CGCGGTCATC GACAACCGCG CCGGCCAATG GCGCGTCGGT
GAGCCGGTCA CGACCTCAAT CCAGCTTCCC GGCAGCGGCT CAGCCGCGCT GCTCGTGCCG
CAAAGTGCGG TTCAGACGGT CGAGGGCCGC TCCACCGTGT TCGTCCGCAC CGAACACGGC
TTCAAGGCCA CGCCTGTCAC GCTCGGGAGC CCCAACGGGG ACAATGTGGT CGTGACGTCG
GGGCTCAAGG GCGATGAACA GCTCGCCGGG CCGAACAGCT TCACCCTCAA GGCCGAGCTT
GGAAAAGGCG AAGCGGAGCA CGGGCACTGA
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| Protein sequence | MKTRYIAALP LTFAALLMVG CSGGDQPADN AQNAATAEKG AAPEAGGHAE EEGEIELSAD
QIRKAGIEMV RVIRSGGGAL TLPATIEGDP QGMQVVSAAI GGRVVSLTRN LGQLVGRGQT
LAIIESREAA TLNAEIEAAR ARLALAESNL RREQRLFNER VSPEQDLIAA RTAATEARIA
LRLAQQQVSA AGGGGGALNR IAINAPLSGQ VVARSVTLGQ TVAADAELFR VANLGRVAVT
LALSPADAGK VLPGSQIEVV AGDRRSVARV DFVSPILDEA TRLATVIAVI DNRAGQWRVG
EPVTTSIQLP GSGSAALLVP QSAVQTVEGR STVFVRTEHG FKATPVTLGS PNGDNVVVTS
GLKGDEQLAG PNSFTLKAEL GKGEAEHGH
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