| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2518 |
|---|
| Symbol | |
|---|
| ID | 4081629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2654126 |
|---|
| End bp | 2655091 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010896 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617558 |
|---|
| Protein GI | 103487997 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATG ACCTTGCGGG CCGCGCCGGC CTCCTCGAAA TCCTGTCCTG GGCACGGCCC
CATGACAGCG CGACCGAACG CGCCTTCTGC CGCGAATATC TCGACCGGGT TCCCGGCATC
CGCGCCGATG GTTTCGGCAA CCGAATGCTG GAAATCGGCG ATCGCCCGCG CACATTGTGG
AGCTGCCATG TCGATACGGT CGCGGCCGTC GGCGGGCACC AGGCGGTGGG CGTCGATGAA
TATGGCATCG CGCATCTGTG CGACGGCAAA GCGGGCATGT CGCTCGGCGC CGACGACGGC
GCGGGACTGT GGATCATGCT CGGCATGATC GCGGCCGCGC GTCCCGGCCT CTACCTCTTC
CATCGCGGCG AGGAGCAGGG TTGCCTCGGC TCGCGCTGGA TCGAGCGCCA CACGCCCGAA
CTTCTCGCGG ACATCGACGC GGCGATCGCC TTCGACCGCG CGGGGCTTGG CGATGTCATC
ACCCACCAGA GCTATGGCCG GACATGCTCC GATGCCTTCG CATCGAGTCT TGCGGCGGCG
CTCAACCGGC AGAATATGGG GTTCCGCTAT GCCCCCGACG ATACCGGCGT CTACACCGAC
ACCAATGAAT ATGCCGGCAT CGTTTCCGAA TGCACCAATC TGTCGGTGGG CTATCAGCGT
CAGCACGGGC CGCGCGAGAC GCTCGATGTC GTCCACTGCG AGCAATTGCT CGCAGCCATG
CTCGAACTCG ATGCGTCGCA GCTGGTGATC GAGCGCGATC CTTCCGTCCA GGAAGAGGCC
GGTTGGTGGT TCGACCGCGG GCGCAGGCAT GGTGGTGATG ATTTCGTCGA AGCCGTCGCC
GATCATCCGG CGCTCGCGGC CTGGATGCTC GAGCAATGCG GGGTCAGCTA TGATGACTTC
CAGATGGCGC TGTGGGCCGA GGAAATGGAC GACGACCGGG GTTATCGTCC GCTCATGCCG
ACCTGA
|
|---|
| Protein sequence | MTHDLAGRAG LLEILSWARP HDSATERAFC REYLDRVPGI RADGFGNRML EIGDRPRTLW
SCHVDTVAAV GGHQAVGVDE YGIAHLCDGK AGMSLGADDG AGLWIMLGMI AAARPGLYLF
HRGEEQGCLG SRWIERHTPE LLADIDAAIA FDRAGLGDVI THQSYGRTCS DAFASSLAAA
LNRQNMGFRY APDDTGVYTD TNEYAGIVSE CTNLSVGYQR QHGPRETLDV VHCEQLLAAM
LELDASQLVI ERDPSVQEEA GWWFDRGRRH GGDDFVEAVA DHPALAAWML EQCGVSYDDF
QMALWAEEMD DDRGYRPLMP T
|
|---|
| |