| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2488 |
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| Symbol | |
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| ID | 4081364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2626482 |
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| End bp | 2627546 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010866 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_617528 |
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| Protein GI | 103487967 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.386498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.835222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGTC CCGGCGATTC TCATCCTCGC AACCTGGCGT CACCAGCGTC GGCTGGCGCG
CGGCGACAGC GAGCCGTCCT GGCAAATCTC GTCGCCGCCA TCGAACCCGA CAATAGCGCG
GCGATAGCTG AGGCTCTGCT GGCGGAACAT CGCACGCTCG CGCGCATCCT CGTGCAGTCC
CCGGAGACGC TGGCGAGAAC GCTTGGCAAA GACAGCGCGG TCAGCGCATT GCTTTGCGCA
ACGCAGGCGG CCGCGATCCA ATCGTTGCGG GCCGACCTCG ACGACCGCGG CATCGATCCC
GCCAATCCGA AACTGCTTCG CTATCTCAAA TTGTCGATGG GCGCTTTGCC GCATGAAACG
CTCAGGGTGC TGTTTCTCGA CCCGGCGCGC CGCCTGATCG CCGACGAACA ATTGCAGCAG
GGCACCATCG GCCATGTCGC AATCTATCCC CGCACGATAT TCCGGCGCGC AGTTGAACTC
GATGCCGCCG CGATTATTCT TGTCCACAAT CATCCGAGCG GCGATCCGAC ACCGAGCGAG
GCCGACGTGG CGACAACAGC GCGGCTGGCG GCCATAGGCC GGGCGCTCGA AATCCAGTTG
CTCGAACATA TCGTCGTCGC GCTGCGCGGC CACCGGGCCA TCCTCAAACA AGGGACCGCG
CTTCTCTACT CCCCTGCGCC CGACCATTTT CTATGCGACA GATCCGGCAA CTGGCACAGC
GCGCCCGATG CCCCGCGCGC GCTGGCGAAC GCACAGCGCG CCGCCCGACG GCGGCTGCTC
CGTCGGCAGC TCGTCGGCAC GCCCAGCCTC TTCGGCGAAC CGGCCTGGGA CATGCTCGTC
GAGCTGTTCA TCCATGAGGC CGAGGCCAAA CCCGTTTCCA CCAGTTCACT CTGCATTTCG
TCGGGCCTTC CGATGAGCAG CGCGCTCCGG CTCCTGCAGC GCCTGACCGA CGCCGGCCTT
GTCACGCGCG AGGCCGACCG GACCGATGGG CGGCGCAATT TCATTCTGCT CGACCCCGAT
CTCGGGCACC GCCTCATGGC ATATTTTGCG GAAGGCGATG AATGA
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| Protein sequence | MAGPGDSHPR NLASPASAGA RRQRAVLANL VAAIEPDNSA AIAEALLAEH RTLARILVQS
PETLARTLGK DSAVSALLCA TQAAAIQSLR ADLDDRGIDP ANPKLLRYLK LSMGALPHET
LRVLFLDPAR RLIADEQLQQ GTIGHVAIYP RTIFRRAVEL DAAAIILVHN HPSGDPTPSE
ADVATTARLA AIGRALEIQL LEHIVVALRG HRAILKQGTA LLYSPAPDHF LCDRSGNWHS
APDAPRALAN AQRAARRRLL RRQLVGTPSL FGEPAWDMLV ELFIHEAEAK PVSTSSLCIS
SGLPMSSALR LLQRLTDAGL VTREADRTDG RRNFILLDPD LGHRLMAYFA EGDE
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