Gene Sala_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2375 
Symbol 
ID4080815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2497764 
End bp2498111 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content66% 
IMG OID638010755 
Producthypothetical protein 
Protein accessionYP_617417 
Protein GI103487856 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.276306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0198627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACC GCTATACGAG CTTCGGGGAT TTCTGGCCCT TTTACCTGCG CGAGCATAGC 
AAGGCGTCGA CACGCGCATT GCACTATGTC GGGACCAGCC TCGTCGTCAT GATTGCGGTC
GGCGCGGCGC TGACGGGGCG GTGGGAATGG CTGATCGCGC TGCCGGTCGC GGGTTATGCC
TTTGCGTGGG TCGCGCATTT CGCGGTCGAG AAGAACCGAC CCGCGACCTT CACCTATCCG
CTGTGGAGCC TCGCCGCCGA TTTCCGGATG TGGGCGTTGT GGCTGAGCGG GCGTCTGGAT
CCCGAACTCG ACCGCGCGGG GGTCGTGCGG CACGACCACC CGGAGTGA
 
Protein sequence
MAHRYTSFGD FWPFYLREHS KASTRALHYV GTSLVVMIAV GAALTGRWEW LIALPVAGYA 
FAWVAHFAVE KNRPATFTYP LWSLAADFRM WALWLSGRLD PELDRAGVVR HDHPE