| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2363 |
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| Symbol | |
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| ID | 4080764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2488624 |
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| End bp | 2489268 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010743 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_617405 |
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| Protein GI | 103487844 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.630601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.137832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCG TAGGGGGGGC ACGGATCGCG GTAGACCAGT TTGCCGCCGT TTCCGTCGAC
TCCATCGAGG ATCAGTTGCG CGAATTGCGC CGCGAACGCG ATGCCTTGCG CCGCGAGAAT
CGTGTGCTGA AGATCGCGGT TGCCGAACTC GAGCGCGTGT CCGAACGCGA CACGCTGACC
CCCCTGTTCA ACCGTCGCTA TTTCCTGACC GCGATCCATC ACCGCATGGC GCGCTTCGAA
CGCCACTCCG AACGCGCCGC GGTCGTGTTC GTCGACGTCA ACCAGCTCAA ATATGTCAAC
GACACATTTG GCCACGCCGC GGGCGATTTT GCGCTGATGG AAATTGCCAA ACGCCTCGCC
GCGTCGATCC GCGCCACCGA CGTGGCGGCG CGCATCGGCG GCGACGAGTT CGGGCTGATC
CTCGACCAGT CGACCGAGGA GGGCGCGCGC GCGCAGGTCG AACGGCTGCG CGGCATACTG
ACCGCCGCGC CCGCGCAGTA TGACGGACAC GAGATCGCGC TTTCGGCCTG CTTCGGCGTC
GCGATGCTGC AAACGGGCAT GACCGAATCG GACATATTGG CCGCCGCCGA CCGCGACATG
TACAAAAGCA AGCAAAGGCA GGACGTGCCC GTGGGACACC GCTAA
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| Protein sequence | MDSVGGARIA VDQFAAVSVD SIEDQLRELR RERDALRREN RVLKIAVAEL ERVSERDTLT
PLFNRRYFLT AIHHRMARFE RHSERAAVVF VDVNQLKYVN DTFGHAAGDF ALMEIAKRLA
ASIRATDVAA RIGGDEFGLI LDQSTEEGAR AQVERLRGIL TAAPAQYDGH EIALSACFGV
AMLQTGMTES DILAAADRDM YKSKQRQDVP VGHR
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