Gene Sala_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2334 
Symbol 
ID4080581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2462304 
End bp2462738 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content68% 
IMG OID638010714 
Producthypothetical protein 
Protein accessionYP_617376 
Protein GI103487815 
COG category[S] Function unknown 
COG ID[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.424462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT TTCGTCCCCT GTCCGCCCAG TTCAGCGTCG CGCCACAGAT CGGTATCACC 
GATGTCGCCG AAGCGAAAGC GCAAGGCTTT GCGATGGTGA TCAACAACCG CCCCGACGGC
GAGGAGCCCG CGGCGCCCCA AGGCGACGAA ATTGCTCACG CTTGCGCCGC CGAGGGGCTG
GCCTATGCCG CGATCCCGAT CGGCCGTTCC GGGTTCAGCC ACGCGCAGAT CGACGCGCTC
GACAAGTTGC TCGGCGATGC GACCGGACCG ATCCTCGCCT ATTGCCGGTC GGGAACGCGC
TCGACGCATT TATGGGCGCT GGCGCGTGCG CGCGCCGGCG AGGATGTCGG CGCGATCGTC
GAGGCTGCGG CGAAGGCGGG CTATGATCTG TCGGGGTTGC GGCCGATGCT CGACGCGCTG
GCGGGGGAAC GGTGA
 
Protein sequence
MSDFRPLSAQ FSVAPQIGIT DVAEAKAQGF AMVINNRPDG EEPAAPQGDE IAHACAAEGL 
AYAAIPIGRS GFSHAQIDAL DKLLGDATGP ILAYCRSGTR STHLWALARA RAGEDVGAIV
EAAAKAGYDL SGLRPMLDAL AGER