Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2301 |
Symbol | |
ID | 4080797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2428332 |
End bp | 2428943 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638010680 |
Product | hypothetical protein |
Protein accession | YP_617343 |
Protein GI | 103487782 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.669339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGATCG TTCAATACTA TTCTCATCTT AACGGCTTCG AGTTCCTCAA GTATCACAAA GCCCACATCT GGGATGATCT CGAAGCCGTC GTAGCTGCTG TCGATGCCGA AGCCTGTCGG ACCAAGGCGT CAGCGGAGGC TCGGAAAGAA GGGCGTCTGC TATACTCCCC AGTGGATATG AACAAAGAGT TCGCGCGCCT ATTTGCGGAC CATCATTGGA CCGAGCGACG GGTTACAAAC TGGCTGTCAG AGGACACCTC GCTATTGCGG GATATAATGT CCCTTGAACC GCAGGCGCAG AAGGAAATGA TTGAGGCGCG AGGCCTTGAG CCGATTATGA CCTACAATCA AACCGATTTC GTGAAGGATA GGGTAGCGGT CGAAATACAG TTCGGCAAAT ATGCGTTTGT CGCGCATGAC CTGTTCGTTA AACATATGTC ATTCTTCATT AGCGATGACA TAGACGTCGG TATCGAGGTC GTGCCCATGA AGTCGATGGA ACGCGAAATG TCTTCTGGGG TTCCCTACTA CGAGCGGGAC CTATTCAATC TCATGCGGCA GGGACGTGGC ATTCCCGCGG TACCGATCAT CTTGGTCGGC GTCGCGCCCT GA
|
Protein sequence | MRIVQYYSHL NGFEFLKYHK AHIWDDLEAV VAAVDAEACR TKASAEARKE GRLLYSPVDM NKEFARLFAD HHWTERRVTN WLSEDTSLLR DIMSLEPQAQ KEMIEARGLE PIMTYNQTDF VKDRVAVEIQ FGKYAFVAHD LFVKHMSFFI SDDIDVGIEV VPMKSMEREM SSGVPYYERD LFNLMRQGRG IPAVPIILVG VAP
|
| |