Gene Sala_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2280 
Symbol 
ID4080737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2403015 
End bp2404559 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content64% 
IMG OID638010659 
Producthypothetical protein 
Protein accessionYP_617322 
Protein GI103487761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAG CCACGATCGC CGTCATGGCG CTGATTGCAG CGATGACGAC GACGGGTGCA 
GAGGCCAAGT GGCTGCGCGC CGACACCGAC AATTTCATCA TCTATAGCGA AAGCAGCGAG
CGGTCGCTGC GCAGCTTTGC CGAAAAGCTG CAGCGTTTCG ACGCAACCTT GCGCGTCCGG
CTCCGGATTC CGGGCGGGAA GGAGCCCAAT CGGCTGACCA TCTATCTGGT GCCCCGCGCC
GCCGACGCGG GGCGGCTCGC GACCGGCGAG TCCGGATCGT CGATCGCGGG ATTCTACAGC
GCCGACCTCG ACGGCAGCTT TGCGGTCTCG CATCGCGAGG TAATCGAGTT CAAGGGCACA
TCGGCGGCGC AGCAGACGCT GTTTCACGAA TATACGCATC ATTTCATGAA GCGCTATTTC
GCTGCGGCCT TTCCCGCCTG GTTCATCGAG GGTTTCGCCG AATTCTACTC GACCGCCGAT
TTCACCGGCA AGGGTCAGTA TCAGGTGGGT CGTCCCGCCT ATTTCCGGGC GCACGGGCTG
ATCAACATGC CCCGCATTCC GGTGGCGGAT CTGTTGCTGA AAAAACCGCG CGAAATGCGG
TCGTCGGGCC AGATGGACGT TTACTACGGC CGTGCATGGC TGCTCACGCA CATGCTTTAT
TACCATCCCG ATCGCGCCGG TCAGCTGACC GCCTATATCG ACGCGATCAA TCGCGGCGAA
GACGGAGAGA AAGCGGCGGT CGCGGCCTTC GGCGACCTCG TCGCGCTCGA TCGCGACCTT
CAGCGCTATC TTGGACGCCC ACTGACCTTC ATGACATCGG CGGAGCCCAT CCCCGTCCCC
GGAACGGTCA CGGTGACGGT GCTCCCCAAT GCCGAGGATG CGCTGCTGCA ATGGCGCCTC
GAGCGGCGAA GCGCGCGAGG CGGTGAACGG CTGGCCGAGG TGCGTGACGA GCTGCGGAAA
CTCACCGCCG AATATGGCGA CAGCGCCGGC ATCTGGTACG AACTGGCACG CGCCGAATGG
GATCTGGGAG ACGAGAAGCG CGACGCCGCG GCAGCGCGGG CCGCGGTCGA CAAGGCGCTG
GCGATCGAGC CGAAGCACGT TCGCGCCAAT ATATTATTGG GCGAAATGAT GATCCACGAC
CTTGGCCATC GCGACACGGT TTCCAACGCG GACTGGGTGG CGGCACGTCA GCCGATCATC
CTTGCCAACA ACACCGATCC CGACGACCCT GTCCCGCTCT ACGCCTATTA TGACAGCTTT
TTACGGCAGG GCATCACGCC GCCGAAGATT GCGGTCACCG GGCTGGAGCG CGCATTTGCG
CTCGGTCCCG AAAGCGCCGA CGCGCGCATC GCCTATGCGC TTGCCCTCGC GCACGACGGG
GACCTCGATC GCGCGACCCG GCTGGCGAAG GTCGTTGCGT TCGACCCGCA CGACGACGGA
CAGGGCGAGA GGATTCTGGC ACAGATCGAA TCAATGCGCG AAAGGAGTGG CGGCACCGGA
AAAGGCGCCG CCGCCCCGGT CGCACCCGCC GACGCCGATC AATAA
 
Protein sequence
MRKATIAVMA LIAAMTTTGA EAKWLRADTD NFIIYSESSE RSLRSFAEKL QRFDATLRVR 
LRIPGGKEPN RLTIYLVPRA ADAGRLATGE SGSSIAGFYS ADLDGSFAVS HREVIEFKGT
SAAQQTLFHE YTHHFMKRYF AAAFPAWFIE GFAEFYSTAD FTGKGQYQVG RPAYFRAHGL
INMPRIPVAD LLLKKPREMR SSGQMDVYYG RAWLLTHMLY YHPDRAGQLT AYIDAINRGE
DGEKAAVAAF GDLVALDRDL QRYLGRPLTF MTSAEPIPVP GTVTVTVLPN AEDALLQWRL
ERRSARGGER LAEVRDELRK LTAEYGDSAG IWYELARAEW DLGDEKRDAA AARAAVDKAL
AIEPKHVRAN ILLGEMMIHD LGHRDTVSNA DWVAARQPII LANNTDPDDP VPLYAYYDSF
LRQGITPPKI AVTGLERAFA LGPESADARI AYALALAHDG DLDRATRLAK VVAFDPHDDG
QGERILAQIE SMRERSGGTG KGAAAPVAPA DADQ