Gene Sala_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2253 
Symbol 
ID4080556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2367158 
End bp2368153 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content69% 
IMG OID638010631 
Productferrochelatase 
Protein accessionYP_617295 
Protein GI103487734 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CCCCCGATCA TCCTCCCGTT CGGCCGCCCC GCGTCGCCGT GCTGCTCGTC 
AACCTCGGCA CCCCCGACGC GCCCGATCCG CCGTCGGTGC GCCGCTATCT CAGACAATTT
CTGTCCGACC GGCGTGTCGT CGAAATCCCG CCAATCCTGT GGCAGCCGAT CCTGCGCGGC
ATCATCCTGA CGACACGGCC GAAAAAATCG GCGCACGCCT ATGCGCAGGT GTGGACCGGG
GACGGTTCGC CGCTCGCCGC GATCACCCGC GCACAGGCGG CGGCGCTGCA AGGCGCGCTC
GGCGAAGGCG TCGCGGTCGC TTATGCGATG CGTTACGGCG AACCGGCGAT CGGCCGCGCG
ATCGACGCGC TGACTGCCGC GGGGTGCCGC CGCATCCTCG TCGCGCCGCT CTATCCGCAA
TATTGCGCGG CGACGACCGC GACCGTCGTC GATGCCGCCG CCGACCATCT GAAGACGCTG
CGCTGGCAGC CCGCGCTGCG TTTCCTGCCG CCTTACCACG ACGATCCCGC CTATCTGGCG
GCGCTGAAGG CCTCGGTCGA AGCGGGGCTT GCGACGCTCG ATTTCATCCC CGACGTGCTG
CTCGCGAGCT TTCACGGGAT GCCCGAGCGC ACGCTCCATC TCGGCGATCC CTATCATTGC
CAGTGCCAAA AGACCGCGCG CCTGCTTTCG GACATGCTCG GTCGCCCCGT CGAGGTCGCC
TTCCAGTCGC GCTTCGGCCG CGCCAAATGG CTCGAACCCG CGACCGATAC GCGGCTCGAA
GCGCTGGGCG CGGCGGGCAA GAGCGTTGCG GTCTTTGCGC CGGGCTTTGC CGCCGACTGC
CTCGAAACGC TCGAGGAGCT GGCGATGCGC GGCAAGGAAC AGTTCATGGC GGCGGGGGGC
AAGCAATTCG CCTACCTCCC CTGCCTCAAC GCCGACGCTC CCGGCATGGC GATGATCGAG
GCGCTCGTCC GCCGCGAGCT GGCGGGCTGG ATCTGA
 
Protein sequence
MTLPPDHPPV RPPRVAVLLV NLGTPDAPDP PSVRRYLRQF LSDRRVVEIP PILWQPILRG 
IILTTRPKKS AHAYAQVWTG DGSPLAAITR AQAAALQGAL GEGVAVAYAM RYGEPAIGRA
IDALTAAGCR RILVAPLYPQ YCAATTATVV DAAADHLKTL RWQPALRFLP PYHDDPAYLA
ALKASVEAGL ATLDFIPDVL LASFHGMPER TLHLGDPYHC QCQKTARLLS DMLGRPVEVA
FQSRFGRAKW LEPATDTRLE ALGAAGKSVA VFAPGFAADC LETLEELAMR GKEQFMAAGG
KQFAYLPCLN ADAPGMAMIE ALVRRELAGW I