| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2223 |
|---|
| Symbol | |
|---|
| ID | 4080294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2335130 |
|---|
| End bp | 2335753 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638010601 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617265 |
|---|
| Protein GI | 103487704 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2860] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.100096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.83946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCC AGACCCTCAT TCGCCTGCTC GACCTGATCG GCATCGGCGT CTTCGCGCTG
TCGGGCGCGC TGATGGCGGT GCGGCTGCGG CAGACGCTCG TGACCGCCGC CTTCTTTGCG
CTCGTCACCG GGGTCGGCGG GGGCAGCGTG CGCGACCTGC TGATCGGTGC GCCGGTTTTC
TGGGTGCAGG ATGGGGCGAT TGCCGCGGTG TGCATCGCGA TCGCGCTGAC CGTTTGGGTG
ACGCCCGAAC GCTGGTGGCA GGGGCAATTG CTCGAATGGG CCGACGCGGT GGGGCTTGCC
GCCTATGCCG TGTTCGGCAC GGCAAAGGCG CTGGCGTGGG GCGTGCCGCC CGTGCCGGCG
CTGCTGATGG GCGTGATCAC CGGCTGCGTC GGCGGGACGA TCCGCGACAT TTTGGCGGGC
GTGCCCTCGA TCATCGTCCG CCCCGAAGTC TATGTGACCG CCGCGGCGCT CGCCTCGGGG
CTGTTCCTGC TGCTGATCTG GCTTGGCGCC GGCACGCCGG TGGCGGCGGT CGTCGGCGCG
CTCGCCGGTT TTGCGCTGCG CGGCGCGGCG ATCCACTGGT CGCTAGCGCT CCCCTCCTAT
CGCGGGCATC GCGGCGAGGG CTAG
|
|---|
| Protein sequence | METQTLIRLL DLIGIGVFAL SGALMAVRLR QTLVTAAFFA LVTGVGGGSV RDLLIGAPVF
WVQDGAIAAV CIAIALTVWV TPERWWQGQL LEWADAVGLA AYAVFGTAKA LAWGVPPVPA
LLMGVITGCV GGTIRDILAG VPSIIVRPEV YVTAAALASG LFLLLIWLGA GTPVAAVVGA
LAGFALRGAA IHWSLALPSY RGHRGEG
|
|---|
| |