Gene Sala_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2183 
Symbol 
ID4080217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2292879 
End bp2293670 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID638010561 
Producthypothetical protein 
Protein accessionYP_617225 
Protein GI103487664 
COG category[S] Function unknown 
COG ID[COG2833] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC TCGGCGAAGC CGCGCGCGCG GTGCTGCTGA CTGCGGACCC ACACGCCAAG 
CGCCGCGCGG CGCGCGGTCT GGCGCGCGCC TGGCGGCGCG GCGAGCTTGC GCATCGCTGT
GACGTCGCGA TGCCAGACCG GCCCGCACGG CCCGCGCGGC CCGAACTGCT CGCGCCCGCG
CAGATGCCGC GCCGCCGCAA GGGCGGGTCG GAGCGTGGCC GGATCGCGAT GCTCCACGCG
CTCGCGCATA TCGAGTTTGT CGCGATCGAC CTGGCGGTCG ATCTGGTCGG GCGCTTCGGC
GGCGAGTTTC CGCGCGGATT CGTCGACGAC TGGATCGGCG TCGCCGCCGA CGAGGCGATG
CACTTTGCGC TGCTCGACCG GCGGCTGCGC CAGCTCGGCA GCTTCTATGG CGATTTGCCC
GCGCACGCGG GATTGTGGGA AGCGGCCGAA GCGACGCGCG ACGACGCGCT CGCGCGGCTC
GCGATCGTGC CGATGGTATT GGAAGCGCGC GGGCTCGACG TCACCCCGGC GACGGTCGAC
CGCTTCCGCG CCGCGGGCGA CGAGGTGTCG GCAAAGATTT TATCGCGTAT TTACAACGAT
GAAATCCGCC ATGTGCGCGC GGGCACCGTC TGGTTCGGGC AAAAGTGCGA CGAACTGGGA
TTCAACGCCG TCGAAACGTG GCACGCGCTC GTGAAATCGC GGTTTCGGGG GGCTTTGAAG
CCGCCTTTCA ACGACTCGGC GCGTGCTCGC GCCGGTTTAA CGCAAGAATA CTACGCCGTT
ATTGCTTCGT AA
 
Protein sequence
MATLGEAARA VLLTADPHAK RRAARGLARA WRRGELAHRC DVAMPDRPAR PARPELLAPA 
QMPRRRKGGS ERGRIAMLHA LAHIEFVAID LAVDLVGRFG GEFPRGFVDD WIGVAADEAM
HFALLDRRLR QLGSFYGDLP AHAGLWEAAE ATRDDALARL AIVPMVLEAR GLDVTPATVD
RFRAAGDEVS AKILSRIYND EIRHVRAGTV WFGQKCDELG FNAVETWHAL VKSRFRGALK
PPFNDSARAR AGLTQEYYAV IAS