Gene Sala_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2170 
Symbol 
ID4080204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2279593 
End bp2279829 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content60% 
IMG OID638010548 
Producthypothetical protein 
Protein accessionYP_617212 
Protein GI103487651 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.78955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CCCTGACCGA CCAGATTTAC GGCCTGATCG CCCCGTTCAA CAAAAAGGGC 
ATCGCGCTGA CCGACGCGAC GACCTTTGCC GGCGACCTGG AATGGGACAG CCTGACGGTG
ATGGACTTCG TCGCCGAGGT CGAAGACACG TTCGACATCA TCATCAGCAT GAACCAGCAG
GCCGAGATAG AGAATGTCGG CCAGCTGGTC GCGGCGGTGG AAAAACTGCA GGGCTGA
 
Protein sequence
MSTALTDQIY GLIAPFNKKG IALTDATTFA GDLEWDSLTV MDFVAEVEDT FDIIISMNQQ 
AEIENVGQLV AAVEKLQG