| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2146 |
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| Symbol | |
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| ID | 4080143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2253691 |
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| End bp | 2255886 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010524 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_617188 |
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| Protein GI | 103487627 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.423847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC AGACCCCCAT CGGAAGCGGC TGCCCCGTCC ACCAGCCCGG CGGCGTTCGC
TCGCTGCTCG GCCGCACCAA CAAGGACTGG TGGCCCGACA TGCTGGCGAC CGAGATACTG
ACTCCGAACG GGCCGTCGAA CCCGATGGGT GAGGATTTCG ATTATGCCAA GGCGTTCAAG
TCGCTCGACT ATTATGCGCT GAAGGACGAT CTCAAGGCGC TGATGACCGA CAGCCAGCCC
TGGTGGCCCG CCGATTATGG CCATTACGGG CCCTTTTTCA TCCGAATGGC GTGGCACGCC
GCGGGCACCT ATCGCACCGC CGACGGCCGC GGCGGCGCCA ACAGCGGGCA ACAGCGTTTC
GCGCCGCTCG ACAGCTGGCC CGACAACGGC AATCTCGACA AGGCGCGCCG CCTGCTTTGG
CCGATCAAGC AGAAATATGG CAACAAGATC AGCTGGGCCG ACCTGTTCAT CCTGGCTGGC
AATGTCGCGA TCGAAAGCAT GGGCGGTCCG GTGTTCGGCT TTGGCGGCGG GCGCGTCGAT
GTCTATGAAC CCGAGCGCGA CATCTATTGG GGCAGCGAAG ACAAATGGGT CAATCAGGGC
GTGCAGACGC GCATCGACCC GGCGAAGGGG ATGGAGACGA TCGAAGGTCC GCTCGCCGCG
ATCCAGATGG GCCTGATCTA CGTCAATCCC GAGGGGCCGC AGGGCAACCC CCACGACGAT
GAGGGGATGG CGCGCGACAT GAAGGAAACC TTCAAGCGCA TGGCGATGAA CGACGAGGAA
ACCGTTGCGC TCACCGCTGG CGGCCATACT TTTGGCAAGG CGCACGGCAA TGGCGACCCT
TCGCTGCTCG GCCCCGCGCC CGCGGGCAGC GACCTTGCCG CGCAGGGTTT CGGCTGGGTC
AGCAGCCACG AGAGCGGCGG CATCGGCGAA CATGCCGTCA CCAGCGGCAT CGAGGGCGCG
TGGACCAACA CCCCGCGCGA GTGGACCGAG AATTATTTCC GCCTGCTGTT CGACTATGAC
TATGAACTTG TGAAGTCGCC CGCCGGTGCC TGGCAGTGGC AGCCGATCAA CCAGAAAGAG
GAGGATATGG CCCCGGCGGC GTGGGATCCC GGCATCAAGG TCCCGACGAT GATGACCACC
GCCGACATGG CGCTGAAGCG CGATCCCGCC TATCGCGCGA TCAGCGAGCG GTTCCGCAAC
GACCATGAAG CCTTCAAGGA CGCCTTCGCG CGCGCCTGGT TCAAGCTCAC GCACCGCGAC
ATGGGGCCGA AGGTCCGTTA TCTCGGCCCC GAAGTCCCTG ACGAGGATCT GATCTGGCAG
GATCCGATCC CCGCGGGCAC CAAGCCCTCG GACGCCGAAG TTCAGGCGGT GAAGGACAAG
ATCGCCGCGA GCGGTCTGAC CGTCAGCCAG CTCATCAAGA CCGCCTGGGC GTCGGCCAGC
ACGTTCCGCA AGTCCGATTT CCGCGGCGGC GCCAATGGCG CGCGCGTGCG CCTCGCGCCG
CAAAAGGACT GGGAGGTCAA CGAACCCGCG ATGCTCGCCA GGGTGCTGGA CACGCTCGAT
GGCCTGCGCG GCAGCCTGTC GATGGCCGAT GCGATCGTGC TCGGCGGCGT GGTCGGGCTT
GAAAAGGCGA TCAGGGATGC GGGCTTCAAC GTCGCCGTGC CGTTTACGGG CGGCCGCGGC
GATGCGACGC AGGAGCAGAC CGACGTCGAA AGCTTTGAGG TGATGGAGCC CGAGGCCGAC
GCCTTCCGCA ACTATGTGGG CAAGAAGAAG CTCGCGGTGA AGGTGGAGGA AATGATGCTC
GACAAGGCGT CGCTGCTCGG CCTGTCGGTG CCCGAAATGA CCGTGCTGAT CGGCGGGCTG
CGGGTGCTCG GCGCCAATCA TGGCGAGCGC GGCCACGGCC ACTTCACCAG GCGGTCGGGT
CAGCTCACCA ACGATTTCTT CGTCAACCTG CTCGACATGA CCAATGTGTG GAAGGCGGTC
GAGGGATCGA ACGACCAGGA ATATGTCGCC ACCGACCGCA CGACCGGCGG CGAGACCTGG
CGCGCGACTC GGGCCGATCT GATCTTCGGT TCCAATTCGG AACTGCGCGC GGTGGCCGAA
GTCTATGCCG AGAACGGCCA TGAAGAGAAG TTCGTGCGCG ACTTCGTGAA GGCGTGGACC
AAGGTGATGA ACGCCGACCG TTTCGACCTC GCCTGA
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| Protein sequence | MNDQTPIGSG CPVHQPGGVR SLLGRTNKDW WPDMLATEIL TPNGPSNPMG EDFDYAKAFK
SLDYYALKDD LKALMTDSQP WWPADYGHYG PFFIRMAWHA AGTYRTADGR GGANSGQQRF
APLDSWPDNG NLDKARRLLW PIKQKYGNKI SWADLFILAG NVAIESMGGP VFGFGGGRVD
VYEPERDIYW GSEDKWVNQG VQTRIDPAKG METIEGPLAA IQMGLIYVNP EGPQGNPHDD
EGMARDMKET FKRMAMNDEE TVALTAGGHT FGKAHGNGDP SLLGPAPAGS DLAAQGFGWV
SSHESGGIGE HAVTSGIEGA WTNTPREWTE NYFRLLFDYD YELVKSPAGA WQWQPINQKE
EDMAPAAWDP GIKVPTMMTT ADMALKRDPA YRAISERFRN DHEAFKDAFA RAWFKLTHRD
MGPKVRYLGP EVPDEDLIWQ DPIPAGTKPS DAEVQAVKDK IAASGLTVSQ LIKTAWASAS
TFRKSDFRGG ANGARVRLAP QKDWEVNEPA MLARVLDTLD GLRGSLSMAD AIVLGGVVGL
EKAIRDAGFN VAVPFTGGRG DATQEQTDVE SFEVMEPEAD AFRNYVGKKK LAVKVEEMML
DKASLLGLSV PEMTVLIGGL RVLGANHGER GHGHFTRRSG QLTNDFFVNL LDMTNVWKAV
EGSNDQEYVA TDRTTGGETW RATRADLIFG SNSELRAVAE VYAENGHEEK FVRDFVKAWT
KVMNADRFDL A
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