Gene Sala_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2128 
Symbol 
ID4080103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2233157 
End bp2233759 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content63% 
IMG OID638010504 
Productcarotene hydroxylase 
Protein accessionYP_617170 
Protein GI103487609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.287054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACC GGCGGGATCC CGGCCTTCGC CGGGATGACG CGCGGAGTAT GGCATCATGT 
CTTCGACGCG CCTATAATCC CCATATGTCG CTCCCCGCCA TCCTTTTCCT TGTCCTCGCC
ACCGTCATCG CGATGGAGGG CGTCGCTTGG GCGTCGCACA AATATATCAT GCATGGCTTT
GGCTGGGCGT GGCACCGCGA CCATCACGAA CCGCACGACA ACCGCCTCGA AAAGAACGAT
CTGTTCGCGC TGTTCGGCGC GGCGATGAGC ATTTCGGCCT TCGCCATCGG CAGTCCGATG
ATCATGGGTG CCGCGGCGTG GAAGCCGGGA ACGTGGATCG GGCTCGGCAT CCTCCTTTAC
GGCATCATCT ATACGCTGGT GCACGACGGG CTCGTCCACC AGCGCTATTT CCGCTGGGTC
CCGCGCCGCG GCTATGCCAA GCGGCTCGTG CAGGCGCACA AGCTCCATCA TGCGACGATC
GGCAAAGAGG GCGGGGTGAG TTTCGGCTTC GTCTTTGCGC GCGATCCCGC GAAGCTGAAG
GCCGAATTGA AAGCCCAGCG CGAGGCCGGG ATCGCGGTGG TGCGCGAGGC TTTGGCCGAT
TAA
 
Protein sequence
MSHRRDPGLR RDDARSMASC LRRAYNPHMS LPAILFLVLA TVIAMEGVAW ASHKYIMHGF 
GWAWHRDHHE PHDNRLEKND LFALFGAAMS ISAFAIGSPM IMGAAAWKPG TWIGLGILLY
GIIYTLVHDG LVHQRYFRWV PRRGYAKRLV QAHKLHHATI GKEGGVSFGF VFARDPAKLK
AELKAQREAG IAVVREALAD