Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2128 |
Symbol | |
ID | 4080103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2233157 |
End bp | 2233759 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010504 |
Product | carotene hydroxylase |
Protein accession | YP_617170 |
Protein GI | 103487609 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.287054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACC GGCGGGATCC CGGCCTTCGC CGGGATGACG CGCGGAGTAT GGCATCATGT CTTCGACGCG CCTATAATCC CCATATGTCG CTCCCCGCCA TCCTTTTCCT TGTCCTCGCC ACCGTCATCG CGATGGAGGG CGTCGCTTGG GCGTCGCACA AATATATCAT GCATGGCTTT GGCTGGGCGT GGCACCGCGA CCATCACGAA CCGCACGACA ACCGCCTCGA AAAGAACGAT CTGTTCGCGC TGTTCGGCGC GGCGATGAGC ATTTCGGCCT TCGCCATCGG CAGTCCGATG ATCATGGGTG CCGCGGCGTG GAAGCCGGGA ACGTGGATCG GGCTCGGCAT CCTCCTTTAC GGCATCATCT ATACGCTGGT GCACGACGGG CTCGTCCACC AGCGCTATTT CCGCTGGGTC CCGCGCCGCG GCTATGCCAA GCGGCTCGTG CAGGCGCACA AGCTCCATCA TGCGACGATC GGCAAAGAGG GCGGGGTGAG TTTCGGCTTC GTCTTTGCGC GCGATCCCGC GAAGCTGAAG GCCGAATTGA AAGCCCAGCG CGAGGCCGGG ATCGCGGTGG TGCGCGAGGC TTTGGCCGAT TAA
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Protein sequence | MSHRRDPGLR RDDARSMASC LRRAYNPHMS LPAILFLVLA TVIAMEGVAW ASHKYIMHGF GWAWHRDHHE PHDNRLEKND LFALFGAAMS ISAFAIGSPM IMGAAAWKPG TWIGLGILLY GIIYTLVHDG LVHQRYFRWV PRRGYAKRLV QAHKLHHATI GKEGGVSFGF VFARDPAKLK AELKAQREAG IAVVREALAD
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