| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2110 |
|---|
| Symbol | |
|---|
| ID | 4080085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2218445 |
|---|
| End bp | 2219641 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638010486 |
|---|
| Product | polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_617152 |
|---|
| Protein GI | 103487591 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.402198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGGC TGCCCGACGC CGCCTGGCGC GACCGGCCGG GGCTGCGCCG CATCGTCGCC
GCGCTTGCCG ACGATGGCGG CGCGGTCAAG GTCGTCGGTG GCGCGGTGCG CGACACCTTG
CTCGGCCTTG ATGTCACCGA CGTCGACCTT GCGACCCCGC TTGTCCCCGG AGAGGTGACG
CGGCGGCTGG AAGCGGCGGG AATCAAGGTG ATCCCGACCG GAATCGCGCA CGGCACCGTC
ACCGCGATCG CCAGCGGCGA CCATCACGAG ATCACGACGC TTCGCCGCGA CGTCGCGACC
GACGGCCGCC GTGCGACAGT GGCCTTCGCC GACGACTGGC GCGAGGATGC GGCGCGCCGC
GACTTCACGA TCAACGCGCT TTATGCCGAT CCCCGGACGG GCGCGATCGA CGACTGGTTC
GGGGGCCTTG CGGATCTTGA CCGCGGCCGC GTCGCGTTCA TCGGCGACGC CGCCTCGCGC
ATTGCCGAGG ATCATCTGCG CATCCTGCGC TTTTACCGCT TCGCCGCGCG CTTCGGGCGT
GGCGACCTCG ATCCCGCAAG CCATGCCGCG GTTGTCGCGG CGCGGCAATC GCTCAAAAGC
CTGTCGCGCG AACGCATCGC CGACGAACTC GCCAAGATAT TGGCGCTGCC CGACCCGCGC
GCGATCGTCG CGCAGATGCA CGCCGACGGC ATCCTCGCCG TGCTGCTGCC CGAACTCGAC
GCCGGCTTTG CGGCGGCGCT CGACCGGCTG TTCGCAAACG AAGCGGTGGC CGGTGCTGTG
CCCGCGGCGC TTCGCCGCCT CGCCGCGCTG CTCCCCGCCG ATGTCGCGAT CGCCGAACAG
GTGGCGAGCC GCCTGCGCCT GTCGACACGC CAGCGCAAGC ATCTCGCCGC GCTCGGCGGC
CACCGCCACG ATGTCGCGCG TCCGGTGCGC CAGCTGGCGT ACGCCATCGG GATCGAGGCG
GCGCGCGACG TGCATCTGCT GGCGGGCGAT CCTGCCGCGC TTCGGACGCT GTCGGACTGG
CAGGTCCCCA TGCTCCCGGT GAAGGGCGGG GACATCGTCG CGCGCGGCAT TGCGGCGGGG
CCTGAGGTGG CGCGCATCCT GAAGGCGGTC GAGGCCGCGT GGGTGGCCGA AGATTTCCCG
GACGCCGCGC GCGTCGCCGA GCTGGTCGAT CAGAAGATCG GCCGCGTCAG CGACTGA
|
|---|
| Protein sequence | MTRLPDAAWR DRPGLRRIVA ALADDGGAVK VVGGAVRDTL LGLDVTDVDL ATPLVPGEVT
RRLEAAGIKV IPTGIAHGTV TAIASGDHHE ITTLRRDVAT DGRRATVAFA DDWREDAARR
DFTINALYAD PRTGAIDDWF GGLADLDRGR VAFIGDAASR IAEDHLRILR FYRFAARFGR
GDLDPASHAA VVAARQSLKS LSRERIADEL AKILALPDPR AIVAQMHADG ILAVLLPELD
AGFAAALDRL FANEAVAGAV PAALRRLAAL LPADVAIAEQ VASRLRLSTR QRKHLAALGG
HRHDVARPVR QLAYAIGIEA ARDVHLLAGD PAALRTLSDW QVPMLPVKGG DIVARGIAAG
PEVARILKAV EAAWVAEDFP DAARVAELVD QKIGRVSD
|
|---|
| |