| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2108 |
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| Symbol | |
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| ID | 4080083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2214367 |
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| End bp | 2216700 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010484 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_617150 |
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| Protein GI | 103487589 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.258471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTC AGCCTTGCTA TCGGCGGCCG ATAATGGCCA GCACAACCGA CGACCTTCCC
CCTTCCGAGT CCGGCACCAG CATCGATACC CCGTTCGACA GCGCGCTGTC GCAGCGCTAT
CTCGTCTATG CGCTGTCGAC GATCACCGCG CGCTCGCTCC CCGACCTTCG CGACGGGCTG
AAGCCCGTCC ACCGCCGCCT TTTGTGGGCG ATGCGCGCGA TGCGGCTCGA CCCGAGCCAG
GGCTACAAGA AATCGGCGCG CGTCGTCGGC GACGTCATCG GCAAGTTCCA CCCGCACGGC
GACACCGCGG TTTACGACGC GATGGTCCGC CTCGCGCAGG ATTTTTCGCT CCGCTATCCG
CTCGTCGACG GCCAGGGCAA TTTCGGCAAT ATCGATGGCG ATAACGCCGC CGCCTATCGC
TATACCGAAG CGCGCCTGAC GCGCGTTGCG GTCGACCTGA TGCAGGGGCT CGACGAAGGC
ACGGTCGATT TCCGCCCGAC CTATAATGGC GAAGACGAAG AGCCCGAGAT CATGCCGGGG
CTTTTCCCGA ACCTGCTCGC CAATGGGGCG AGCGGGATCG CGGTCGGGAT GGCGACGAAC
ATCCCGCCGC ACAATGCCGC CGAGGTGATC GACGCCGCGC TGCTGCTGAT CGACAATCCA
AAAGCCGGGC TGTCCGATCT GCTCGACCAT GTGAAGGGCC CCGATTTCCC CACCGGCGGC
ATCGTCGCCG AGAATGCGGA GACGATCGCG CAGGCCTATG AAAGCGGGCG CGGCAGCTTT
CGCGTCCGCG CGCGCTTTTC GATCGGCAAG GATGCTGACG GCAAGTGGGA AGCCGACGGG
ATCGAGAAGC TGTCCGGCGG CACCTGGCAG CTCGTCATCA GCGAGATTCC CTATGGCGTT
GCCAAGGGAA AGCTGATCGA ACAGGTGGCG CAGCTGATCG CCGACAGGAA ACTGCCAATT
CTGGAAGATG TCCGCGACGA AAGCGCGGAG GATCTGCGCA TCGTGCTGGT GCCCAAGAGC
CGCAACGTCG ACGCCGAGGT GCTGAAGGAC AGCCTCTATC GCCTGACCGA CCTTGAAAGC
CGTTTCGCGC TCAATCTGAA CGTGCTCGAC GCGACGCGCA CGCCCAAGGT CATGGGGCTG
AAACAACTGC TCACCGAATG GCTCCAGCAC CAGATCATCG TGCTCGTCCG CCGCGCCGAG
CACCGGATCG CGAAGATCGA CGACCGGCTG GAGCTGGTCG CCGGTTACAT CATCGCCTTT
TTGAACCTTG ACCGGATCAT CGAGATCATC CGTACCGAGG ACGAACCCAA GCCGGTGATG
ATCGCCGAGT TCGAGCTGAC CGACCGGCAG GCCGAGGCGA TATTGAACAT GCGGCTGCGG
TCCTTGCGCA AGCTCGAGGA AATGGAGCTG AAGCGCGAGC AGACCGATTT GACCGCCGAG
CGCGAGGAAC TGGCAAAGCT GGTCGAGAGC CCCGCGCGCC AGCGCACCCG GCTGCGCAAG
GACCTCGAAA GGCTGCGCGG CGTCTATGGC CTCGACACGT CGCTTGGCGC GCGCCGCACG
ACGATCGCCG AAGCCGCGCC GACGCGGGAG ATTCCGCTCG ACGCGATGAT CGAAAAGGAG
CCGGTGACGG TGATCCTGTC GAAGCGCGGC TGGATTCGCG CGCAGCGCGG CCATGTCGCG
CCCGACCAGT GGGGCGAGTT CAAGTTCAAG GAAGGCGACG AATTGTTGTT CGCCGCGCAT
GCGCAGACGA CCGACAAGCT GTTGATCGCC GCGAGCGACG GGCGCTTTTT CACCGTCGGG
GCGGACAAAT TGCCCGGCGG GCGCGGGTTC GGCGAGCCGC TGCGGCTGAT GGTCGACATC
GACCCCGACG CGCGGATCGT CGCGATGGTC CCCGCGAGCG CCGGGGGCCG CCTGCTGCTC
GCCTCGACGA GCGGGCACGG TTTCATCGTC AACACCGACG ATGTCACCGC CGAAACGCGC
AAGGGCCGCA ATGTCGTCAA TCTGAAACCC AGGGCGGCGC TTGTCGTCGC CCGCCCGATC
GCGCCGGGCG ACGACAGCGT CGCGGTGGTC GGCGACAATC GCAAGCTGGT TGTATTCCCG
CTCGCCGAAG TGCCGGTGAT GGGGCGCGGC CAGGGCGTGA TGCTGCAACG TTATCGCGAC
GGCGGCCTGT CCGACGCAGT GAGCTTTGTC CTTGCCGAGG GACTGAGCTG GGCGATGGGC
GGCGACAGCG GCCGCACGCG CACCGAAACC GACCTGGCAC CCTGGCGCGT CGCGCGCGGC
GCGGCGGGAC GGATGCCGCC AACCGGTTTT CCGCGCAACA ACCGCTTCGC CTGA
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| Protein sequence | MARQPCYRRP IMASTTDDLP PSESGTSIDT PFDSALSQRY LVYALSTITA RSLPDLRDGL
KPVHRRLLWA MRAMRLDPSQ GYKKSARVVG DVIGKFHPHG DTAVYDAMVR LAQDFSLRYP
LVDGQGNFGN IDGDNAAAYR YTEARLTRVA VDLMQGLDEG TVDFRPTYNG EDEEPEIMPG
LFPNLLANGA SGIAVGMATN IPPHNAAEVI DAALLLIDNP KAGLSDLLDH VKGPDFPTGG
IVAENAETIA QAYESGRGSF RVRARFSIGK DADGKWEADG IEKLSGGTWQ LVISEIPYGV
AKGKLIEQVA QLIADRKLPI LEDVRDESAE DLRIVLVPKS RNVDAEVLKD SLYRLTDLES
RFALNLNVLD ATRTPKVMGL KQLLTEWLQH QIIVLVRRAE HRIAKIDDRL ELVAGYIIAF
LNLDRIIEII RTEDEPKPVM IAEFELTDRQ AEAILNMRLR SLRKLEEMEL KREQTDLTAE
REELAKLVES PARQRTRLRK DLERLRGVYG LDTSLGARRT TIAEAAPTRE IPLDAMIEKE
PVTVILSKRG WIRAQRGHVA PDQWGEFKFK EGDELLFAAH AQTTDKLLIA ASDGRFFTVG
ADKLPGGRGF GEPLRLMVDI DPDARIVAMV PASAGGRLLL ASTSGHGFIV NTDDVTAETR
KGRNVVNLKP RAALVVARPI APGDDSVAVV GDNRKLVVFP LAEVPVMGRG QGVMLQRYRD
GGLSDAVSFV LAEGLSWAMG GDSGRTRTET DLAPWRVARG AAGRMPPTGF PRNNRFA
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