Gene Sala_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2107 
SymbolglpX 
ID4080082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2213344 
End bp2214315 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID638010483 
Productfructose 1,6-bisphosphatase II 
Protein accessionYP_617149 
Protein GI103487588 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1494] Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 
TIGRFAM ID[TIGR00330] fructose-1,6-bisphosphatase, class II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.230288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA GCGGCAGCAA CCTCGACCGG GTGCTCGTGC TCGAGATGGT GCGCGTCACC 
GAAGCCGCGG CGATCGCCGC CGCGAAGCTG ATCGGCCGCG GCGACGAAAA GGCCGCCGAT
GCCGCCGCGG TCGAGGCGAT GCGGGGCGCC TTCAACACGC TGTACATGGA CGGCACCATC
GTCATCGGCG AGGGCGAGCG CGACGAAGCG CCGATGCTCT ATATCGGCGA AAAGGTCGGG
AATGCGCCCG GCAAGGGGCC AAAGATCGAC ATCGCCGTCG ACCCGCTGGA GGGCACGACG
ATCACCGCCA AGGCCGGTCC CAACGCGCTC GCGGTGCTGG CGATCGCCGA GGAAGGCTGC
CTTTTGAACG CCCCCGACGT CTATATGGAC AAGCTGGCGG TCGGCCCCGG CTATTCGCCC
GACATCATCG GATTCGACAA GAGCGTGCGC GAGAATGTCG CGGCGGTCGC GCGCGAAAAG
GGCGTCGCGC CCGAAGAGAT CATCGTGTGC GTGCTCGACC GCCCGCGTCA CGAGGCAATC
ATCGCCGAAC TGCGCGCGAT CGGCTGCGGC GTCGCGCTGA TCCCCGACGG CGACGTCGCC
GGGGTGATCG CGACGACCAA CCCCGATACC AATATCGACC TTTACATGGG ATCGGGCGGC
GCGCCCGAGG GCGTGCTCGC CGCCGCGGCG CTGCGCTGCG TCGGCGGCCA GTTCAAGGGC
CGCCTGCTCT TCCGCAACGA CGACGAGCGG CTGCGCGCGA AAAAATGGGG AATCGAGGAT
CTCGACCGCG TCTATGACCT GGGCGATCTG GCCAGGGGCG ACGTGATCTT CGCCGCCACC
GGCGTCACCG ACGGATCGCT GCTGCGCGGC GTCAAGCACC GCCGCGGCGG CGGGCTGACC
ACCGAAAGCG TTGTCATGCG CGCCTCGTCG GGCACGGTGC GCTGGGTGCG CGGCGAGCAT
CGCGCCGGCT GA
 
Protein sequence
MTNSGSNLDR VLVLEMVRVT EAAAIAAAKL IGRGDEKAAD AAAVEAMRGA FNTLYMDGTI 
VIGEGERDEA PMLYIGEKVG NAPGKGPKID IAVDPLEGTT ITAKAGPNAL AVLAIAEEGC
LLNAPDVYMD KLAVGPGYSP DIIGFDKSVR ENVAAVAREK GVAPEEIIVC VLDRPRHEAI
IAELRAIGCG VALIPDGDVA GVIATTNPDT NIDLYMGSGG APEGVLAAAA LRCVGGQFKG
RLLFRNDDER LRAKKWGIED LDRVYDLGDL ARGDVIFAAT GVTDGSLLRG VKHRRGGGLT
TESVVMRASS GTVRWVRGEH RAG