Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2018 |
Symbol | |
ID | 4079955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2128631 |
End bp | 2129152 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638010394 |
Product | Smr protein/MutS2 |
Protein accession | YP_617062 |
Protein GI | 103487501 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00401089 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCCGC TACCGAACGC GCCCTCGCCG CTCGCTCCCG CCGCGCCGCC GACCATCGCG CCGCCGAGGT CCACGCCGCG CGACACCGCC CCGCGTGCGG CTGCCATCCC GCACGGCCCG GCTCCGCTCC CCCCAGCACG CCGCACACAC AGCGCCGCAA CGCTCGACGG CCATTGGGAT CGCCGCCTGC GCAAGGGGCT CGTCCGTCCC GACATGAGCA TCGACCTGCA CGGCCACACG CTCGCTTCGG CGCAGACACA GCTCGACGAC GCGATTGGCC GCGCGCTGCA CCGCGGCGCG CGCGTGCTGC TCGTCGTCGC CGGGCGTCTC CGCCCCGGTG CTGACCGTCT GCCACAGACG CATGGCGCTC CGCGCCCGCG CGGCGCGATT CGCGCGGCGC TCCCCGACTG GCTCGCCGTC TCGCCCCACG CCGATCGGAT TGTCGCGCTG CGCCCCGCGC ATATCAGCCA CGGCGGCGCG GGCGCGGTCT ATGTGATCCT CCGGCGCAGC CGCGAGGATT AG
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Protein sequence | MTPLPNAPSP LAPAAPPTIA PPRSTPRDTA PRAAAIPHGP APLPPARRTH SAATLDGHWD RRLRKGLVRP DMSIDLHGHT LASAQTQLDD AIGRALHRGA RVLLVVAGRL RPGADRLPQT HGAPRPRGAI RAALPDWLAV SPHADRIVAL RPAHISHGGA GAVYVILRRS RED
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