Gene Sala_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2018 
Symbol 
ID4079955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2128631 
End bp2129152 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content76% 
IMG OID638010394 
ProductSmr protein/MutS2 
Protein accessionYP_617062 
Protein GI103487501 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00401089 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGCCGC TACCGAACGC GCCCTCGCCG CTCGCTCCCG CCGCGCCGCC GACCATCGCG 
CCGCCGAGGT CCACGCCGCG CGACACCGCC CCGCGTGCGG CTGCCATCCC GCACGGCCCG
GCTCCGCTCC CCCCAGCACG CCGCACACAC AGCGCCGCAA CGCTCGACGG CCATTGGGAT
CGCCGCCTGC GCAAGGGGCT CGTCCGTCCC GACATGAGCA TCGACCTGCA CGGCCACACG
CTCGCTTCGG CGCAGACACA GCTCGACGAC GCGATTGGCC GCGCGCTGCA CCGCGGCGCG
CGCGTGCTGC TCGTCGTCGC CGGGCGTCTC CGCCCCGGTG CTGACCGTCT GCCACAGACG
CATGGCGCTC CGCGCCCGCG CGGCGCGATT CGCGCGGCGC TCCCCGACTG GCTCGCCGTC
TCGCCCCACG CCGATCGGAT TGTCGCGCTG CGCCCCGCGC ATATCAGCCA CGGCGGCGCG
GGCGCGGTCT ATGTGATCCT CCGGCGCAGC CGCGAGGATT AG
 
Protein sequence
MTPLPNAPSP LAPAAPPTIA PPRSTPRDTA PRAAAIPHGP APLPPARRTH SAATLDGHWD 
RRLRKGLVRP DMSIDLHGHT LASAQTQLDD AIGRALHRGA RVLLVVAGRL RPGADRLPQT
HGAPRPRGAI RAALPDWLAV SPHADRIVAL RPAHISHGGA GAVYVILRRS RED