Gene Sala_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1944 
Symbol 
ID4082893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2048964 
End bp2049713 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID638010321 
Productalpha/beta hydrolase fold 
Protein accessionYP_616989 
Protein GI103487428 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA TCAGCGGCCG CCCGGCGATC AGCACCCAGC ATGTCCATGG CCTGACGCTG 
CGCGTCGCGC GCTGGCGCCA GGGTGCGCCG GGCACCCCCC TCCTGTTCCT CAACGGCATC
GGCGCCGACA TTGCTGCGGC GGCACCGCTG CTTGCGCAGA TGCACGGGCG CGAGGCGTGG
ACGTTGGACA TGCCGGGGGT CGGCGGCTCG CCCGATGCGC TGCTCCCCTA TGCCGCGCCG
ACGATGGCCG CGATCGTCAT GGAAATCGCC CGACGGTTCG GTCACGAGTC GCTCGACGTC
GCGGGCTTCA GCTGGGGCGG CGCGCTGGCG CAGCAGGTCG CGATCCAGTT TCCGGGGCGC
GTCCGCCGAC TGGTGCTGAT GGCGACGACG CCGAGCGTCG GCGCGCCGGG GATCGGCTGG
GCCGCGCTGC TCGACGACGA CATGCTGGCG AGCGGACTCA GGCGGCCGAC CGCGACGCCG
CTTGGCCTTG CCTATCAGTC GCTGGCGATG GCGGGGTGGA CGAGCGCGGC GATGCTGCCA
CTGTTGAAGG ACGTGCCCGT GCTGGTGCTG ATGGGCGAGC GCGACGGCGT GGTCCCCGCC
TGCCACGGAC AGACGATCGC CGAGCTGATC GACGGCGCGG TGCTGGAGGT GGTGCCGGGC
TCGCACCTTT TTCCCTTCAC CCACGCCGGG ACGGTCGCGG CGCGGATCAG CGCCTTTCTG
GAGCGGCCGC CGCTGCAAGC CGCCGCGTGA
 
Protein sequence
MSRISGRPAI STQHVHGLTL RVARWRQGAP GTPLLFLNGI GADIAAAAPL LAQMHGREAW 
TLDMPGVGGS PDALLPYAAP TMAAIVMEIA RRFGHESLDV AGFSWGGALA QQVAIQFPGR
VRRLVLMATT PSVGAPGIGW AALLDDDMLA SGLRRPTATP LGLAYQSLAM AGWTSAAMLP
LLKDVPVLVL MGERDGVVPA CHGQTIAELI DGAVLEVVPG SHLFPFTHAG TVAARISAFL
ERPPLQAAA